Candidatus Carsonella ruddii (Diaphorina cf. continua): CRDco_1890
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Entry
CRDco_1890 CDS
T09287
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
crr
Candidatus Carsonella ruddii (Diaphorina cf. continua)
Pathway
crr00300
Lysine biosynthesis
crr00470
D-Amino acid metabolism
crr01100
Metabolic pathways
crr01110
Biosynthesis of secondary metabolites
crr01120
Microbial metabolism in diverse environments
crr01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
crr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CRDco_1890 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CRDco_1890 (dapF)
Enzymes [BR:
crr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
CRDco_1890 (dapF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
BCG49416
UniProt:
A0A7R6VYM2
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All DBs
Position
170794..171543
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AA seq
249 aa
AA seq
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MNKFFKIHTCGNDFLVIFYKKSFIILNKYINRKFGISCDQLLIINKINLKNKIIKIQIYN
NNLSIAKNCGNGIRCLSWFFLIKTKKNNFISFDLNKNYIHSWKRKKIFTLYKFPHFIKKL
LIRINNIFLNSCFVNLINLHIVFFVNNIRTKKLKFVSKTIKYFFNDAYNIEFIQILKNNK
IYIRIFEKAIGETYSCGSGIISSICYIYKYIFKKKNFFVNSIGGYCQIIVSNSNIIIYGN
VNFCYFGFI
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgaataagttttttaaaattcacacttgtggaaatgattttttagttattttttataaa
aaatctttcatcattttaaataaatatataaatagaaaatttggtataagctgtgatcaa
cttttaataattaataaaataaacttaaaaaataaaataataaaaattcaaatttataat
aataatttatcaattgcaaaaaattgtggaaatgggattagatgtttatcatggtttttt
ttaataaaaactaaaaaaaataattttataagttttgatttaaacaaaaactatattcat
tcatggaaacgtaaaaaaatttttacattatacaaatttcctcattttattaaaaaatta
ttaataagaattaataacatttttttaaattcttgttttgtaaatttaataaatttacat
attgttttttttgttaacaatattagaacaaaaaaattaaaatttgtttctaaaacaatt
aaatattttttcaatgatgcatacaatatagaatttattcaaatattaaaaaataataaa
atttatattagaatatttgaaaaagctattggagaaacgtattcatgtggatctggtatt
attagttctatatgttatatttataaatatatttttaaaaaaaaaaatttttttgtaaat
tctattggaggatattgccaaattatagtttcaaatagtaatattataatttatggaaat
gtgaatttttgttattttggttttatatga
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