Crassaminicella thermophila: FQB35_03415
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Entry
FQB35_03415 CDS
T06186
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
crs
Crassaminicella thermophila
Pathway
crs03410
Base excision repair
crs03430
Mismatch repair
crs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
crs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FQB35_03415 (recJ)
03430 Mismatch repair
FQB35_03415 (recJ)
03440 Homologous recombination
FQB35_03415 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
crs03400
]
FQB35_03415 (recJ)
DNA repair and recombination proteins [BR:
crs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
FQB35_03415 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FQB35_03415 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
FQB35_03415 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
RE_SacI
DUF3860
Motif
Other DBs
NCBI-ProteinID:
QEK11497
UniProt:
A0A5C0SC38
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All DBs
Position
747177..748889
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AA seq
570 aa
AA seq
DB search
MFETNWEIINEDKDIDDTDSIIKKILRNKGITSDEEIEEFLSSKPKKTYDPYLLKNMREV
VEKIIKYINEKKSIWIYGDYDVDGISSISLLMDFLSKFTNNLNYYIPLREEEGYGLNCDA
IEDIKKKGGELIITVDCGSTSVKEVNLAKELGMEIIVTDHHNLSDEVPNCLILNPKQEDC
HYPFKLLCGCGIAFKLAQAIQKRLDAPKKYLSDVLDLVALATVADVVPLIDENRTLLKYG
LKKINNSKRLGLKALIEAVGLRDKEITAGHIGFVIGPHFNASGRIDDAKASVKLLLSNDA
KIVESLVKHLVKCNKERKAIQEKGLEICKEKVEKYYLEDLFLVVDSEGTHEGVIGIVAGR
IRDLYYKPTLIVTQSQEEGILKGSGRSIDDIDIYEEMKKCEDLFIKFGGHKNACGFSIEK
SKLDLLRKRLNEQALMIKQKSKDAFIKKLRIDCELKPSQITEELIEALKKIEPYGMGNEK
PQFILRQIKVKNEKDSVFMGKNGEHLKLRGVSKFYDDLTEITAIGFGMAKNYKDIGYPQN
VDVVGFPKLNEWNGYKNVQFMIYDLKEKGI
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaactaattgggaaattattaatgaggataaggatatagatgatactgattct
attataaaaaaaatattaaggaataagggaataacgagtgatgaagaaatagaagaattt
ctatcatcaaagcctaaaaaaacctatgatccttatttgcttaaaaacatgagagaagtt
gtagaaaagattataaaatacataaatgaaaaaaagagtatatggatttatggagattat
gatgttgatggaatatctagtatatctttattgatggattttttaagtaaatttacaaat
aatttaaattattatatcccactaagagaagaagaaggatacggtcttaattgtgatgct
attgaagatataaagaaaaagggtggagaacttattattacagtagattgtggttctact
tccgtaaaagaggtaaatcttgcaaaggaattaggcatggaaataattgtaacagatcat
cataatctttctgatgaagttccaaattgtcttatactcaatccaaaacaagaggattgt
cattatccttttaagcttttatgtgggtgtggtattgcatttaaattagcacaggcaatc
caaaaaagattagatgcaccaaaaaaatatttaagtgatgtgctagatttagtagcatta
gctactgtagcagatgtagttcctttaattgatgaaaacagaacgctattaaaatatggt
ttaaaaaaaataaacaactccaaaagattaggactaaaagcattgattgaagctgtagga
ttaagagataaggagattacagcagggcatattggatttgttataggtcctcattttaat
gctagtggtagaattgatgatgcaaaagcaagtgtaaagcttcttttaagcaatgatgct
aaaatagtagaaagcttagttaagcatttagttaagtgtaacaaagaaagaaaagctatt
caggaaaaagggcttgaaatttgtaaagaaaaagtagaaaaatattatttagaggatctt
tttttggtagtagattctgaaggtacacatgaaggggttattggtattgtagcaggaaga
attagggatttatattataagcctacccttatagttacacagtctcaagaagaaggaata
ttaaagggcagtggtagaagtattgatgatatagatatttatgaggaaatgaaaaaatgt
gaagatttatttataaaatttggaggccataaaaatgcttgtggcttttctattgaaaaa
agtaaactagatttattaagaaaaagattaaatgagcaagcccttatgattaaacaaaaa
tcgaaggatgcatttataaaaaaattaaggattgattgtgaattaaagccctctcaaata
acagaagagcttatagaggctttaaaaaaaattgaaccttatggtatgggaaatgaaaag
cctcaatttattttacggcagataaaagtaaaaaatgaaaaagactctgtatttatgggt
aaaaatggagagcatttaaaattaagaggagtatcaaaattttatgatgatttaacagaa
attactgcaattggatttggtatggcaaaaaattataaagatattggttacccccaaaat
gtagatgttgtagggtttcctaagttaaatgagtggaatgggtataaaaatgttcagttt
atgatttatgatcttaaagaaaaaggaatttaa
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