Crassaminicella thermophila: FQB35_03990
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Entry
FQB35_03990 CDS
T06186
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
crs
Crassaminicella thermophila
Pathway
crs03030
DNA replication
crs03430
Mismatch repair
crs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
crs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FQB35_03990
03430 Mismatch repair
FQB35_03990
03440 Homologous recombination
FQB35_03990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
crs03032
]
FQB35_03990
03400 DNA repair and recombination proteins [BR:
crs03400
]
FQB35_03990
Enzymes [BR:
crs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FQB35_03990
DNA replication proteins [BR:
crs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FQB35_03990
DNA repair and recombination proteins [BR:
crs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FQB35_03990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
BDI_0842
Motif
Other DBs
NCBI-ProteinID:
QEK11589
UniProt:
A0A5C0SF48
LinkDB
All DBs
Position
876685..880158
Genome browser
AA seq
1157 aa
AA seq
DB search
MSEFVHLHVHTEYSLLDGAARIKDLIKMVKDMGMKAIAITDHGSMFGVVDFYKEAKKQGV
KPIIGCEVYTASRTMADKDPIKDKRLGHLVLLARNNTGYKNLMKIVSLGYIEGFYYKPRI
DYSVLEKYSEGIIALSACLAGEVQQKILQNDYEGAKKEALRLKNIFGKDYFYLELQDHKI
EEQRMVNNQLIRLSKDTGISLVATNDVHYLRRSDADVHDILLCIQTGKTIDDEERLKFPT
EEFYLKSPEEMEKLFPYAKEALENTVKIAQMCNVEFDFNQIHLPKYDVADGYTAKEYLRK
LCRDGLLKRYENVTKSIQERLDYELRTIENMGYVEYFLIVWDFIRYAKENNIMVGPGRGS
AAGSLVSYTLGITDIDPIKYNLIFERFLNPERVTMPDIDIDFCFERRQEVIDYVIKKYGK
EKVAQIITFGTMAARAAIRDVGRAINMSYAEVDAIAKLIPMQLGISIDKALEINKNLKEL
YEKDERTKYLIDVAKAVEGMPRHASTHAAGVVISKEAIDEYVPLYMHNEGITTQFTMGTL
EELGLLKMDFLGLRNLTVIRDALDSIEKNYGVKIDFSKMEYNDKLVYDLIGKGDTLGVFQ
LESAGMRQFMKDLKPDCFEDIVAGISLYRPGPMDSIPKYIAYKNNPEKIVYLHPKLKPIL
NVTYGCLIYQEQVMQVVRQLGGYSYGRSDLVRRAMGKKKMDVMEQERQYFIHGKKDENGN
YEIAGCVRNGVPEEIANKIYDDMIDFARYAFNKSHAAAYAVLGYQTAYLKAYYPVEFMAA
LITSIMGNAKKVAQYIGDCKKKNIQILPPSVNESQGKFTVENGKIRFGLLAVKNVGIGVI
EAIIKAREEKGKFLSFIDFCEKVEMKEMNKRAIESLIKAGAFDNMGANRAQLLAIYERVI
DGIQQDRRRNLEGQVSLFQAFDEVIPNTVKIDELPDIEEFPQKNLLIMEKEVLGIYVSGH
PLSEFEEEIRSISTINLGDLIDMDENHKDNAIKDGAYIRIAGMIVGRKNKITKNNNMMSF
ITLEDLFSSIEILVFPKIFDKYMNILHEDSIVIVEGKISIREDEEPKIIAEKLLPLLKKR
EGQNKLYLKICKDKDEKELLKKMKPTLKKWKGDVPVYIFLEKENKKLKAHENLWVNVNED
LIEELKRLLGQDCVKIC
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagtttgtccatttgcatgtccatacggaatatagtttgttagatggtgcagct
agaataaaggatttaataaaaatggtaaaagacatggggatgaaagccattgcaataaca
gatcatggctctatgtttggtgttgtagacttttataaagaggcaaaaaaacaaggggtt
aagcctattataggatgtgaagtgtatactgcaagcagaacaatggcggataaagatcct
ataaaagataaaagattagggcatcttgtgttactagctaggaacaatactgggtataaa
aaccttatgaaaattgtatctttaggatatatagaaggcttttattataagcctcgaatt
gactattctgttttagaaaagtatagcgaaggaattattgctttaagtgcttgtttagca
ggtgaagttcagcaaaaaattcttcaaaacgattatgaaggagctaaaaaagaagcatta
agattaaaaaatatatttgggaaagactacttttatttagagttgcaggatcataaaata
gaagaacaacgaatggttaataatcaactaataagattaagcaaggatacaggtatttct
cttgtagcaactaatgatgtccattatttaaggcgtagtgatgcagatgtacatgatata
ctactttgtattcaaactggaaagacaatagatgatgaagaaagactgaaatttccaaca
gaggaattctatttaaaatctcctgaggagatggaaaaattatttccttatgcaaaagaa
gcattagaaaatactgtaaagattgctcaaatgtgtaatgtagaatttgattttaatcag
attcatttaccaaagtatgatgttgctgatggttatacggcaaaggaatatttaagaaaa
ttgtgtagagacggtttgttgaaacgttatgaaaatgtaacaaaaagtattcaagaaaga
ttagactatgagttaagaactatagaaaatatgggatatgtagaatattttttgattgtg
tgggattttataagatatgcaaaagaaaacaatattatggtaggtcctggacgtggatca
gcagcagggagtttggtttcatacaccttaggaattacagatattgatccaataaaatac
aacttaatctttgaaagatttttaaatccagaacgtgtaactatgcctgatatagatatt
gatttttgttttgaaagaagacaagaagttattgattatgtaattaaaaaatatggaaag
gaaaaagtagcacaaattataacctttggaactatggcagcaagggctgctataagagat
gttggacgagctataaatatgtcttatgcagaggttgatgctattgcaaaacttattcca
atgcagcttggaataagcatagataaagcattagagataaataagaatttaaaagaatta
tatgagaaggatgagaggactaagtatttaattgatgtagcaaaagccgtagaaggaatg
ccaaggcatgcttctacccatgcagcaggtgtagtgatttcaaaagaggctattgatgaa
tatgttccgttatatatgcataatgaaggtattactactcaatttacaatgggaacctta
gaagaattagggcttttaaagatggactttttagggcttagaaatttaaccgtaataaga
gatgctctagatagtattgaaaaaaactatggtgtaaagattgatttttctaagatggaa
tataatgataagttggtatatgatttgataggtaagggtgataccttaggggtattccag
ctagagagtgcaggaatgaggcagtttatgaaggatttaaagccagactgctttgaagat
attgtagcgggtatttctctttatagacctggacctatggattctattccaaagtatata
gcttataagaataatccagaaaaaatagtttatttgcatccaaaactaaaaccaatactc
aatgtgacgtatggatgcttaatctatcaagaacaggttatgcaagttgtaagacagcta
gggggctattcatatgggagaagtgacttagttcgtcgtgcaatgggtaagaagaaaatg
gatgtgatggagcaggaaagacaatactttatccatggaaaaaaagatgaaaatggaaat
tatgaaattgcaggctgtgtaagaaatggtgtgcctgaagaaattgcaaacaagatttat
gatgatatgattgattttgcaagatatgcatttaataaatctcatgcagcagcttatgct
gttttaggatatcaaacggcatatttaaaggcatattatccagttgaatttatggcagct
ttaattacgagtattatgggaaatgcaaagaaagttgctcaatatataggagattgtaaa
aagaaaaatattcaaatacttccacctagtgtgaatgagagccaaggaaagtttacagta
gaaaacggaaagattcgatttggccttttggcagtaaaaaatgttggtattggtgtaatt
gaagcaattataaaagcaagagaagaaaaaggtaaatttttaagttttatagatttttgc
gaaaaagttgaaatgaaagaaatgaataaaagagctattgagagtcttataaaagcaggt
gcttttgataatatgggtgctaatcgtgcacagcttttagcaatttatgaaagagttatt
gatggaatacaacaagatagaagaagaaatttagaaggacaagtatctttgtttcaagca
tttgatgaagttattccaaatacagtaaagatagatgaattgccagatatagaagaattt
ccacagaaaaatcttttaataatggaaaaagaagttttagggatttatgtgagtggacat
cctctttctgaatttgaagaagaaataagatcgatttcaaccattaatttaggtgattta
atagatatggatgaaaatcataaagacaatgctataaaagacggagcatatattagaatt
gctggaatgattgtaggtagaaaaaataaaattacaaaaaataataatatgatgtctttt
ataacattagaagatttgtttagttcaattgaaatattagtttttccaaaaatatttgat
aaatatatgaatatactacatgaagatagtattgtaattgttgaagggaagataagcata
agagaagatgaagaacctaaaatcattgcagagaaattacttcctctattaaagaaaaga
gagggacaaaataaattgtacttaaaaatctgcaaggataaagatgaaaaagagttatta
aaaaaaatgaaaccgacactaaaaaaatggaagggagatgtgccggtatacattttttta
gaaaaagaaaataaaaagttaaaagcccatgagaatttatgggtaaatgtaaatgaagat
ttaatagaagaactaaaaagattattaggacaagattgtgtaaagatatgttag
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integrated database retrieval system
