Candidatus Carsonella ruddii (Anomoneura mori): CRAmo_1470
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Entry
CRAmo_1470 CDS
T10773
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
crud Candidatus Carsonella ruddii (Anomoneura mori)
Pathway
crud03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
crud00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CRAmo_1470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crud03021
]
CRAmo_1470
03400 DNA repair and recombination proteins [BR:
crud03400
]
CRAmo_1470
Enzymes [BR:
crud01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CRAmo_1470
Transcription machinery [BR:
crud03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CRAmo_1470
DNA repair and recombination proteins [BR:
crud03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CRAmo_1470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
GUB_WAK_bind
Motif
Other DBs
NCBI-ProteinID:
BFI90966
LinkDB
All DBs
Position
complement(135314..136273)
Genome browser
AA seq
319 aa
AA seq
DB search
MIDFKKNFFLLNKISYKKISFNRSIIKIEPFLNSYCDSLGNFIRRNIFITNYNYQISFVK
IYNINSEFSNLRGVKEDVQEIILNIKKILFKIENDLIAYLVIKKIGPCVIKAKDIFSDKK
IFIFNPNIVIANITQRITFFIIMKCNYSGIKINCNFNNFLFNSRIIKIEKKNILIKNVNY
FIHQKIINKNIKILFIDIETDGSSSPENCFKNCIFYLKKYFYLLFSIINVKKKVIVKESN
TVIINPIFIRSVDNLEISIRASNILKRNNIYLIGDLITKSEQNLLNLKNMNKFIYLEILE
ALKSKRLTLNVKIDYEIQF
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgattgattttaaaaaaaatttttttttactaaataaaattagttataaaaaaatatct
tttaatagaagtattataaaaatagaaccttttttaaattcttattgtgattctttagga
aatttcataagaagaaatatttttattactaattataattatcaaatatcttttgttaaa
atttataatattaattcagaattttcaaatttaagaggtgtaaaagaagatgtgcaagaa
attattttaaacattaaaaaaattttgtttaaaatagaaaatgatttaattgcttattta
gtaataaaaaaaattgggccttgtgtaattaaagctaaagatatattttcagataaaaaa
atttttatttttaatccaaatatagtaattgctaatatcactcaaagaataacttttttt
ataataatgaagtgtaattattctgggataaaaattaactgtaattttaataatttttta
ttcaattctagaataataaaaattgaaaaaaaaaatattttaattaaaaatgtaaattat
tttatacatcaaaaaatcattaataaaaacattaaaattctttttattgatattgaaact
gatggatcatcatcaccagaaaattgttttaaaaattgcattttttatttaaaaaaatat
ttttatttgttattttcaataattaatgttaaaaaaaaagttattgttaaagaaagtaac
acggtaattattaatcctatttttataagatctgttgataatttagaaattagtattaga
gcttctaatattttaaaaagaaataatatatatttaataggggatttgataacaaaatca
gaacaaaatttattaaatttaaaaaacatgaataaatttatatacctagaaatattagaa
gcattaaaaagtaaaagacttacattaaatgtaaagattgattatgaaatacaattttga
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