Clostridium felsineum DSM 7320: CROST_011750
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Entry
CROST_011750 CDS
T08192
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
crw
Clostridium felsineum DSM 7320
Pathway
crw02020
Two-component system
crw02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
crw00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CROST_011750 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CROST_011750 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crw03021
]
CROST_011750 (rpoN)
Transcription machinery [BR:
crw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CROST_011750 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
HTH_12
HTH_11
HTH_23
HTH_26
HTH_Tnp_Tc3_2
Sigma70_r4_2
HTH_IclR
HTH_17
MarR
Sigma70_r4
HTH_36
HTH_21
Fe_dep_repress
HTH_5
HTH_28
HTH_10
HTH_27
MarR_2
HTH_20
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
URZ10465
UniProt:
A0A1S8LQB3
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All DBs
Position
1294896..1296287
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AA seq
463 aa
AA seq
DB search
MNLNFELNLTQQQKLVMTQQMQMSIKLLQMSNIELNDYIKRELEENPLLEGKDRQNDKEY
RSDMSKVDYKEFIKYLDFDNYTHENYHYRNEEEEVSPFNFIGNKKSFTEYLLDQLGEISI
DRYTRPICEYIIENLNSNGYLPDTIEDISRDLHKNFKSVQKALEIVQSLDPSGVGARDIS
ECLKLQIKRKNVNDITLMEIVDKHLADIAENKYNLMAKELNIDTKEAQEYGDYIKSLEPK
PSRGFYTGDEVKYVVPDAFIRKIDNDFYVIMNDSSLPKLSINSTYKNILNNENDKKDVEY
VKEKLNSAMFLLKSIEQRKSTLHEVLNEILKYQNDYFNGITNYLKPMTLKDISEKLEIHE
STVSRAIREKYVYVDTKGLLKIRDMFTTGISTSVNQANKEDLSTQKIKNEIKELIAKEEK
ESPLSDQKISEVLKEKGMNISRRTVAKYREEIGIKSSAKRKRY
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgaattttgaattgaatttaactcagcagcaaaaactagtaatgactcaacaa
atgcagatgtcaattaaacttcttcaaatgtctaatatagaattaaatgattatataaag
agagaattagaggaaaaccctcttttagaaggaaaagaccgacaaaatgataaggaatat
aggtcggacatgagtaaagtagattataaagagtttataaaatatcttgattttgataac
tacactcatgaaaattatcattatagaaatgaagaggaggaggtatcgccttttaatttc
atcggaaataaaaagtcatttacagagtatttgttagatcaacttggggaaatcagtata
gaccgatatactagacctatatgtgagtatataatagaaaatctgaatagtaacggatac
ttaccagatacaatagaagacatatcacgggatttacacaaaaattttaaaagtgtgcaa
aaggcacttgaaatagtacaatccttagatcctagcggggtaggtgctagagatatatca
gaatgtttgaaattacagattaaaagaaaaaatgtaaacgatattaccttaatggaaata
gtggataagcatttagctgatatagctgaaaataagtataatttaatggctaaggagcta
aatatagatactaaagaagcacaagaatatggagattatataaaaagccttgaacctaaa
ccatcgagaggtttctacacaggggatgaagttaaatatgtagttccagacgcatttata
agaaaaatagacaatgatttttatgtaataatgaatgatagttcacttcctaaattatcg
ataaatagtacttataaaaatattttaaataatgaaaatgataaaaaggatgttgaatat
gtaaaagaaaagcttaatagtgctatgtttttgcttaaaagtatagaacaaagaaaaagt
acactacatgaggttttaaatgaaatattgaaataccaaaatgattattttaatggaata
actaattatttaaaaccaatgacacttaaagatatttctgagaaattagagattcatgaa
tctactgtaagtagagctataagagaaaagtatgtttatgttgatacaaaaggtctatta
aaaataagggacatgtttactacgggaatatcaacatcagttaatcaagctaataaagaa
gatttatcaacacagaaaataaaaaatgaaattaaagaattgattgcaaaggaagagaaa
gaaagtcctctgtcagatcagaaaatttcagaagttttaaaggaaaaaggtatgaatatt
tcgagaagaactgtagcaaaatatagagaagagataggaataaaatcatctgctaaaagg
aaacgttattaa
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