Clostridium felsineum DSM 7320: CROST_013310
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Entry
CROST_013310 CDS
T08192
Symbol
cshE
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshE
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
crw
Clostridium felsineum DSM 7320
Pathway
crw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
crw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CROST_013310 (cshE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crw03019
]
CROST_013310 (cshE)
03009 Ribosome biogenesis [BR:
crw03009
]
CROST_013310 (cshE)
Enzymes [BR:
crw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CROST_013310 (cshE)
Messenger RNA biogenesis [BR:
crw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CROST_013310 (cshE)
Ribosome biogenesis [BR:
crw03009
]
Prokaryotic type
rRNA helicases
CROST_013310 (cshE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
URZ10621
UniProt:
A0A1S8M8N7
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All DBs
Position
complement(1480863..1481966)
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AA seq
367 aa
AA seq
DB search
MNFKKLGISEALVKVLKKNGITEPTPVQAESINHIKGGRDAICEAQTGTGKTLAFLLPIF
ENISPDAHYVQALIVTPTRELALQITEEAKKLKEAKDVNILAAYGGKDISSQLKKLKGNT
HLIIATPGRLLDHIQRKTINLSKLKTFVLDEADQMLLMGFKNDIETILKCTPKKLQTLCF
SATISPDVKKLAYRYMKDPLTISTKKQELTLETIKQFVVETTDRKKLDALCTVLKQDNPF
MAIIFGRTKRRVDELEVDLYKRGFDCQKIHSDLTQTKREKIMKSFRNGDFQYLLATDVAS
RGLDISGVSHIYNYDMPENPESYIHRIGRTGRAGEDGYTCLFATERDKKKLADVESTIKS
KLPRREL
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgaactttaaaaaattaggtattagcgaagcccttgtaaaggtgctaaaaaagaatggt
attactgagccaacacctgttcaagctgaaagtataaaccatattaaaggtggaagagat
gctatttgtgaagcccaaacgggtacaggaaaaactctagcatttttacttcctattttt
gaaaatatatcacctgatgcacattatgttcaggctttaattgttactcctacaagagaa
cttgcccttcaaataactgaagaagcaaaaaagcttaaggaagctaaagatgtaaatata
ttagctgcatatggtggtaaggatatatcttctcaattaaagaagctaaaaggcaatact
catcttatcattgccacaccaggaagacttttagatcatattcaaagaaaaactataaat
ttaagtaagctaaaaacttttgtacttgatgaagctgatcaaatgcttttaatgggcttt
aaaaatgatattgaaactattttaaaatgcacacctaagaagcttcaaactctttgtttt
tcagcaactataagtcctgacgttaaaaagttagcatatagatatatgaaagatccgctt
actatatccacaaaaaagcaagaactaactttggaaactattaagcaatttgttgttgaa
actacagacagaaaaaaattagatgctttgtgtactgtgctaaaacaagataatcctttt
atggcaattatctttggtagaactaaaagaagagtagatgaacttgaagtagatctttat
aagcgaggttttgattgccaaaaaattcacagtgatctaactcaaacaaaacgtgaaaaa
ataatgaaatcttttagaaatggtgattttcagtatcttttggctactgatgtggcatca
cgaggtcttgatataagcggagtaagccatatatacaattacgatatgccagaaaatcca
gaaagctacatacatcgtataggaagaactggtagagctggtgaggatggttacacttgc
ttatttgctactgaaagggataagaaaaaattagcagatgttgaaagcactattaaatca
aaattacctagaagagagttgtaa
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