Clostridium felsineum DSM 7320: CROST_017130
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Entry
CROST_017130 CDS
T08192
Symbol
ruvB_1
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
crw
Clostridium felsineum DSM 7320
Pathway
crw03030
DNA replication
crw03430
Mismatch repair
crw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
crw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CROST_017130 (ruvB_1)
03430 Mismatch repair
CROST_017130 (ruvB_1)
03440 Homologous recombination
CROST_017130 (ruvB_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
crw03032
]
CROST_017130 (ruvB_1)
03400 DNA repair and recombination proteins [BR:
crw03400
]
CROST_017130 (ruvB_1)
Enzymes [BR:
crw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CROST_017130 (ruvB_1)
DNA replication proteins [BR:
crw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CROST_017130 (ruvB_1)
DNA repair and recombination proteins [BR:
crw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CROST_017130 (ruvB_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNA_pol3_gamma3
DNAX_ATPase_lid
RuvB_N
AAA_22
AAA_assoc_2
RCF1-5-like_lid
AAA_14
VapE-like_dom
DUF815
DNA_pol3_delta_C
AAA_18
Mg_chelatase
AAA_5
TsaE
AAA_16
Motif
Other DBs
NCBI-ProteinID:
URZ10997
UniProt:
A0A1S8LRG9
LinkDB
All DBs
Position
1900375..1901823
Genome browser
AA seq
482 aa
AA seq
DB search
MLYNDFRPQNFSDMIGQEHITRILKNQIKSGKLSHAYLLCGTRGTGKTTSAKIIAKAVNC
LSPIDGEPCGECEMCRKIKQGICIDITELDAASNNGVEDIRGIISSLIYPPVEAKYKVYI
LDEVHMLSMGAVNAFLKTLEEPPKNVIFILATTDPQKLPITILSRCQKFDFRRIRTEDIY
TRLKYISEKTHINIEDKGLKLIAKVSDGAMRDALSILEQAMSLDTESGVDYKDLLNLLGV
SNNNDLFNITENILENNKIEVLSIVASLDEQGIDLMLLTKDLIKFSRNLLMVKTMKESAL
KVVPMAEEDIEKLKIMCEDTPSDKIIALIKMLQDCELKMKTSSQVRVVLELGLIEYDNNK
NDNSINTIKSDISKLEDEIKELVSKLNGKERISISESDIKVRIKESKERIIETLKNSPKV
NIKHIGEALERTKLKVSVFPKITIISENKEGRLILNNAIECIKRGFAKYLNQPEDEVEIT
VV
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgctttacaatgattttagaccacaaaactttagtgacatgatagggcaggaacatatt
acaagaatacttaaaaatcagattaaatcagggaaactttcacatgcatatttattatgt
ggtacaagaggaactggaaaaacaactagtgctaaaataattgccaaggctgttaattgt
ctttcaccaatagatggagagccatgtggagaatgtgaaatgtgtagaaaaattaagcaa
ggaatatgtatagatattacagaacttgatgctgcttcaaataatggtgtagaagatatt
agaggaataataagttcattaatatatccaccagttgaagcaaagtataaagtttatata
ttagatgaagtccatatgttgtctatgggagctgtaaatgcttttcttaaaacacttgaa
gaaccacctaaaaatgttatcttcattcttgcaacaactgatcctcaaaagcttccaata
actatattatcaagatgtcaaaaattcgattttagaagaatcagaactgaggatatatat
acaagattaaagtatatatcagaaaagactcatataaatattgaagataagggacttaag
cttatagcaaaggtatcagatggggcaatgagagatgcattaagtatattagaacaggct
atgtctcttgatactgaaagtggtgttgattataaggatttattgaaccttttaggagtc
agtaataataatgatctttttaatataacagaaaatatattagaaaataataagattgaa
gtattaagtattgttgcttcactggatgaacaaggtatagatttaatgcttttaaccaaa
gatttaataaagttttcaaggaatttgcttatggtcaaaactatgaaagaaagtgccttg
aaagttgttcctatggcggaagaggatattgaaaagttgaaaattatgtgtgaagatact
ccaagtgataaaataatagcactaattaaaatgcttcaagattgtgaattaaaaatgaag
acttcaagtcaagtaagagtagttttggaattaggcttaattgaatatgataacaataaa
aatgataattcaattaatactataaaatcagatataagtaagcttgaagatgaaataaag
gagttagtaagtaagcttaatggtaaagagcgaattagtatttctgaaagtgatataaag
gtaaggataaaagaaagtaaggagaggataattgaaacgttaaaaaattcacctaaagtt
aatataaaacacataggagaagctttagaaaggactaagttaaaagtttctgtatttcct
aaaattacaataatatcagaaaataaagaaggaagattaattttaaataatgctattgaa
tgtataaaaagaggttttgctaaatatttaaatcagcctgaagatgaggttgagattact
gttgtataa
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