KEGG   Clostridium felsineum DSM 7320: CROST_021530
Entry
CROST_021530      CDS       T08192                                 
Symbol
rnjA
Name
(GenBank) Ribonuclease J1
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
crw  Clostridium felsineum DSM 7320
Pathway
crw03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:crw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CROST_021530 (rnjA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:crw03019]
    CROST_021530 (rnjA)
Messenger RNA biogenesis [BR:crw03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     CROST_021530 (rnjA)
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1 CFAP54_N Lactamase_B_6
Other DBs
NCBI-ProteinID: URZ11436
UniProt: A0A1S8MDL5
LinkDB
Position
2368112..2369779
AA seq 555 aa
MRREKDKIKIIPLGGVDEIGKNLTVIEYRDEIAVIDCGLSFPDEEMFGIDLVIPDVTYLI
KNREKVKGIFLTHGHEDHIGALPYVLKELNVPVYGTKLTIGIVETKLKEHNLLSKVDLKV
VKPRDIIKLTSMSIEFIRQSHSIADSVAIAIHTPMGVVLHTGDFKVDYTPIDGCVADFAR
FAELGKRGVLAMMCDSTNVERAGYTMSETTVGETFNTVFTKAKGRIIVATFASNIHRIQQ
IVEAAERYNRKVAVSGRSMENIVAVAIELGYLKVKEGVLIGIDAINRYADNKIVIITTGS
QGEPMSALTRMAAQEHKKVKIQEGDMVVISANPIPGNEKLVSRVINQLFKKGAEVIYEAL
ADVHVSGHACQEELKLMHTLIKPRFFIPVHGEYRHLKQHKELATNLGMSKSNVVIPEIGG
VIELTRNSIRKTDTVVAGKVFVDGLGVGDVGNIVLRDRKHLSQDGIVTVVVTIEKVSGTV
IAGPDIISRGFVYVRESEDLMEESKEIVKTALLECEEKHITEWATIKSNIKDVLRIFLYE
RTKRKPMILPIIMEV
NT seq 1668 nt   +upstreamnt  +downstreamnt
atgcgaagagaaaaggataaaattaaaataatacctctaggtggggtggatgaaatagga
aaaaatcttacagttatagaatatagagatgagatagctgttatagattgcggtcttagt
tttccagatgaagaaatgttcggtatagatttagtaatacctgatgtaacttatttaata
aaaaatagggaaaaggtaaagggaatatttttgactcatggacatgaagatcatattgga
gcgcttccttatgttttaaaagagttaaatgttccagtatatggtactaaacttactatt
ggaattgttgaaactaaacttaaagagcataatttgctaagtaaggttgatttaaaggta
gtgaaacctagagatattataaaactcactagtatgtctattgagttcataagacaaagt
cacagcattgctgattctgtagctatagcaatacatacaccgatgggagttgttcttcac
acaggagattttaaggtggattatactcctatagatggatgtgtagctgattttgcaaga
tttgcagagcttggaaaaagaggagttcttgctatgatgtgcgatagcacaaacgtagaa
agagcaggatatactatgtcagagactacagtgggagaaacatttaacactgtatttaca
aaagccaaaggaagaattatagttgcaacttttgcatctaatattcacagaatacaacaa
atagttgaggcagcagaacgctataatagaaaagtggctgtttcaggtagaagtatggaa
aatatagtagctgttgctattgaacttggctatttaaaggttaaggagggtgtacttata
ggcattgatgctataaataggtatgctgacaacaagatagttataataactacaggaagc
caaggagagccaatgtctgcacttacaaggatggcagctcaggaacataaaaaagtaaaa
atacaggaaggtgatatggtagtaatatcagctaaccctattcctggaaatgaaaaatta
gtttcacgagttataaatcaattatttaaaaagggtgcagaagttatttatgaagcgttg
gcagatgtacatgtatcaggtcatgcatgtcaagaagaattaaaattaatgcatacgctt
attaaacctagattttttattccagttcatggtgaatacagacacttaaagcagcataaa
gaattggcaaccaatcttggaatgtcaaaatcaaatgttgtaattccagaaatcggtggt
gttatagaattaacaagaaatagcataagaaaaaccgatacagttgttgctggaaaagta
tttgtagatggtcttggtgtaggtgatgtaggtaatatagttttaagagatagaaagcat
ctttcacaggatggaatagtaacagtagttgttactatagaaaaagtaagcggtactgtt
atcgcaggacctgacataatttcaagaggtttcgtatatgtaagagaatcagaagactta
atggaagagtcaaaggaaattgtgaaaacagcgcttctagaatgtgaagagaagcatatt
actgaatgggcaactataaaatcaaacataaaggatgtattaaggatattcctttatgag
agaacaaagaggaagcctatgatactccctataataatggaagtataa

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