Clostridium felsineum DSM 7320: CROST_021530
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Entry
CROST_021530 CDS
T08192
Symbol
rnjA
Name
(GenBank) Ribonuclease J1
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
crw
Clostridium felsineum DSM 7320
Pathway
crw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
crw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CROST_021530 (rnjA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crw03019
]
CROST_021530 (rnjA)
Messenger RNA biogenesis [BR:
crw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CROST_021530 (rnjA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
CFAP54_N
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
URZ11436
UniProt:
A0A1S8MDL5
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Position
2368112..2369779
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AA seq
555 aa
AA seq
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MRREKDKIKIIPLGGVDEIGKNLTVIEYRDEIAVIDCGLSFPDEEMFGIDLVIPDVTYLI
KNREKVKGIFLTHGHEDHIGALPYVLKELNVPVYGTKLTIGIVETKLKEHNLLSKVDLKV
VKPRDIIKLTSMSIEFIRQSHSIADSVAIAIHTPMGVVLHTGDFKVDYTPIDGCVADFAR
FAELGKRGVLAMMCDSTNVERAGYTMSETTVGETFNTVFTKAKGRIIVATFASNIHRIQQ
IVEAAERYNRKVAVSGRSMENIVAVAIELGYLKVKEGVLIGIDAINRYADNKIVIITTGS
QGEPMSALTRMAAQEHKKVKIQEGDMVVISANPIPGNEKLVSRVINQLFKKGAEVIYEAL
ADVHVSGHACQEELKLMHTLIKPRFFIPVHGEYRHLKQHKELATNLGMSKSNVVIPEIGG
VIELTRNSIRKTDTVVAGKVFVDGLGVGDVGNIVLRDRKHLSQDGIVTVVVTIEKVSGTV
IAGPDIISRGFVYVRESEDLMEESKEIVKTALLECEEKHITEWATIKSNIKDVLRIFLYE
RTKRKPMILPIIMEV
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgcgaagagaaaaggataaaattaaaataatacctctaggtggggtggatgaaatagga
aaaaatcttacagttatagaatatagagatgagatagctgttatagattgcggtcttagt
tttccagatgaagaaatgttcggtatagatttagtaatacctgatgtaacttatttaata
aaaaatagggaaaaggtaaagggaatatttttgactcatggacatgaagatcatattgga
gcgcttccttatgttttaaaagagttaaatgttccagtatatggtactaaacttactatt
ggaattgttgaaactaaacttaaagagcataatttgctaagtaaggttgatttaaaggta
gtgaaacctagagatattataaaactcactagtatgtctattgagttcataagacaaagt
cacagcattgctgattctgtagctatagcaatacatacaccgatgggagttgttcttcac
acaggagattttaaggtggattatactcctatagatggatgtgtagctgattttgcaaga
tttgcagagcttggaaaaagaggagttcttgctatgatgtgcgatagcacaaacgtagaa
agagcaggatatactatgtcagagactacagtgggagaaacatttaacactgtatttaca
aaagccaaaggaagaattatagttgcaacttttgcatctaatattcacagaatacaacaa
atagttgaggcagcagaacgctataatagaaaagtggctgtttcaggtagaagtatggaa
aatatagtagctgttgctattgaacttggctatttaaaggttaaggagggtgtacttata
ggcattgatgctataaataggtatgctgacaacaagatagttataataactacaggaagc
caaggagagccaatgtctgcacttacaaggatggcagctcaggaacataaaaaagtaaaa
atacaggaaggtgatatggtagtaatatcagctaaccctattcctggaaatgaaaaatta
gtttcacgagttataaatcaattatttaaaaagggtgcagaagttatttatgaagcgttg
gcagatgtacatgtatcaggtcatgcatgtcaagaagaattaaaattaatgcatacgctt
attaaacctagattttttattccagttcatggtgaatacagacacttaaagcagcataaa
gaattggcaaccaatcttggaatgtcaaaatcaaatgttgtaattccagaaatcggtggt
gttatagaattaacaagaaatagcataagaaaaaccgatacagttgttgctggaaaagta
tttgtagatggtcttggtgtaggtgatgtaggtaatatagttttaagagatagaaagcat
ctttcacaggatggaatagtaacagtagttgttactatagaaaaagtaagcggtactgtt
atcgcaggacctgacataatttcaagaggtttcgtatatgtaagagaatcagaagactta
atggaagagtcaaaggaaattgtgaaaacagcgcttctagaatgtgaagagaagcatatt
actgaatgggcaactataaaatcaaacataaaggatgtattaaggatattcctttatgag
agaacaaagaggaagcctatgatactccctataataatggaagtataa
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