Cryobacterium sp. LW097: B7495_00030
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Entry
B7495_00030 CDS
T04908
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
cry
Cryobacterium sp. LW097
Brite
KEGG Orthology (KO) [BR:
cry00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cry03032
]
B7495_00030 (gyrB)
03400 DNA repair and recombination proteins [BR:
cry03400
]
B7495_00030 (gyrB)
Enzymes [BR:
cry01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
B7495_00030 (gyrB)
DNA replication proteins [BR:
cry03032
]
Prokaryotic type
DNA Topoisomerases
B7495_00030 (gyrB)
DNA repair and recombination proteins [BR:
cry03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
B7495_00030 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
ASD20701
LinkDB
All DBs
Position
5670..7649
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AA seq
659 aa
AA seq
DB search
MTIEPKTEPEQHAYGAEDIQVLEGLEAVRKRPGMYIGSTGPRGLHHLVYEIVDNSVDEAL
AGYCDTIDIRILPDGAVRVQDNGRGIPVDIHKAEGKSTVEVVLTVLHAGGKFGGGGYAVS
GGLHGVGSSVVNALSSRLEVEVRRQGHVWRQSFHNGVPNESLHQDEVSDETGTTITFWPS
SETFETTVFDYETLRARFQQMAFLNKGLRLTLTDERADSLDAEDKPLSNSFMYEQGLMDY
VAYLNRAKKAELVNEEIISFEFEDTEKKIALEVAMQWTTAYTESVHTYANTINTHEGGTH
EEGFRAALTTLVNKYAREKGILKEKDDNLSGDDVREGLTAVVSIKLAEPQFEGQTKTKLG
NTEAKAFVQRVVGDQLSDWFNRNPVQAREIIRKSLQAATARMAARKARETARRKGLLEGG
GMPGKLKDCQSKDPAASEIFIVEGDSAGGSAVQGRNPETQAILPLRGKILNVEKARLDRA
LGNAEVQAMITAFGAGIGEDFNQDKVRYHKIVLMADADVDGQHITTLLLTLLFRYMRPLI
DLGYVYLAQPPLYRLKWSNSAHEYVYSDAERDALLADGAAAGKRIPKDNGIQRYKGLGEM
DYKELWETTMAPESRTLLQVTLDDAAAADEIFSTLMGEDVESRRNFIQKNAKDVRFLDI
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgacaattgaaccgaaaactgagccggagcagcacgcttacggcgcagaagacatccag
gttctcgaaggcctcgaagctgttcgcaaacgacccggaatgtacatcggttcaaccggt
ccacgcggtctgcaccacctggtctacgagatcgtcgacaactccgtcgacgaggccctg
gccggctattgcgacaccattgacatccgtattcttcccgatggcgccgtgcgcgtgcag
gacaacggtcgaggtatccctgtcgatatccacaaggcggaaggcaagtccaccgtcgag
gtcgtcctgaccgtgctgcacgccggtggaaagttcgggggcggcggttacgcggtctcc
ggaggactccacggcgtcggcagctcggtggtcaacgcgctctccagccgcctcgaggtc
gaggtgcgccggcagggccatgtgtggcgccagagcttccacaacggtgtgcccaacgag
tcactgcaccaggacgaggtctccgacgagaccgggaccacgatcaccttctggccgagc
tcggagaccttcgagacgacggtcttcgactacgaaaccctgcgcgcgcgcttccagcag
atggctttcctcaacaagggtctacgcctcacgctcaccgacgagcgtgcggacagcctg
gacgccgaggacaagccgctcagcaacagcttcatgtacgagcagggcctgatggactac
gtggcctacctcaaccgggccaagaaggccgaactggtcaacgaggagatcatctccttc
gagttcgaggacaccgagaagaagatcgccctcgaagtggctatgcagtggaccaccgcg
tacaccgagagcgtgcacacctacgcgaacaccatcaacacccacgagggcggtacccac
gaagagggcttccgtgcggcgctgaccaccctggtgaacaagtacgcgcgggaaaaaggc
atcctgaaggaaaaggacgacaacctctccggcgacgacgtgcgcgaaggcctcaccgcc
gtcgtctcgatcaagctcgccgaaccgcagttcgagggccagaccaagaccaagctgggc
aacaccgaggccaaggcattcgtgcagcgggtcgtcggcgaccagctttccgactggttc
aaccgcaacccggttcaggcccgcgagatcatccgcaagtcgctgcaggccgcgaccgcc
cggatggccgctcgcaaggcccgcgagaccgcccgacgcaagggcctgctcgagggtggc
ggcatgccgggcaagctcaaggactgccagagcaaggaccccgccgcctcagagatcttc
atcgtggagggcgactcggccggcggctccgccgtgcagggccgcaacccggagacccag
gcgatcctgcccctgcgcggcaagatcctcaacgtggagaaggcgcgcctggaccgtgcc
ctcggcaacgccgaagtgcaggcgatgatcacggcgttcggcgccggcatcggtgaagac
ttcaaccaggacaaggtgcgctaccacaagatcgtgctgatggccgatgccgatgtcgac
ggccagcacatcaccaccctgctgctcaccctgctcttcaggtacatgcgtccgctgatc
gacctcggctacgtgtacctcgcgcagccgccgctgtaccgactcaagtggtccaactcc
gcccacgagtacgtgtactcggatgcggagcgggacgccctgctcgccgacggcgcggcc
gccggcaagcggatccccaaggacaacggcatccagcgctacaagggcctgggtgagatg
gactacaaggagctgtgggaaaccacgatggctcccgagtcccgcaccctgctccaggtg
accctggacgacgcggcagccgccgacgagattttctccaccctgatgggcgaagacgtc
gaatcccgacgcaacttcatccagaagaacgcgaaggacgtgcgtttccttgacatctga
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