Cryobacterium sp. LW097: B7495_04020
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Entry
B7495_04020 CDS
T04908
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cry
Cryobacterium sp. LW097
Pathway
cry03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cry00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B7495_04020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cry03021
]
B7495_04020
03019 Messenger RNA biogenesis [BR:
cry03019
]
B7495_04020
Transcription machinery [BR:
cry03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
B7495_04020
Messenger RNA biogenesis [BR:
cry03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
B7495_04020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
NACHT
Spore_III_AA
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ASD23874
LinkDB
All DBs
Position
869449..872085
Genome browser
AA seq
878 aa
AA seq
DB search
MTTLRVAELQALAGELGIQGASKLRKGELVDAITANQSHTTESAAATDAAVIDTAVTDVP
AQAAPVEAAAVVTDAPAETAPKKRVSRRVSTATSAPAVAHVNADGDLGLGLIVPETAKTR
KTTAPTTYAGATDNIVADAPVVEKPVRQARKRASTATITEAAIAEAVATANAAEAAAPVA
ETTAAVAAPAAEPATETQAGSGRNRRGNGRNENRNESRNENRNESRNGGRNGGNNRNNNN
NSAATARNAFDARSMIDAQNAEDGYEAPEELEAAPAATDSADSAESTESRIQRPEGVVRA
ERSERGGRQRNQRGARAEQPEQAEPTEQVEPAEQVEPAEQSDSSSTEQSDEQAEQPRQGR
SRNRSRGGDRNQQGDRNQGDRGQADRAQGDRAPQTSDDRGAERGDDRQQNQRQAGNRGQD
RQQQDRQQQDRQGDRQQSDRAQQERQGQDRNQGLDRNSGPEDELNGRNNRSRFRDRKRRG
ATANDDFEPELTDDDVLIPVAGILDVLDNYAFVRTSGYLPGASDVYVSLGQVKKYNLRKG
DAVVGSIRQPHEGDQNGRQKYNAIVKVDSINGLTVEEAASRVEFQKLTPLYPQERLRLET
EPGKLTQRIIDLVAPIGKGQRGLIVAPPKAGKTIVMQQIANAIATNNPEVHLMVVLVDER
PEEVTDMQRTVKGEVIASTFDRPAEDHTTVAELAIERAKRLVELGHDVVVLLDSITRLGR
AYNLTAPPSGRILSGGVDASALYPPKRFFGAARNIENGGSLTILASALVETGSKMDEVIF
EEFKGTGNMELRLSRHLADKRIFPAVDVNASGTRREEMLMSADEVKITWKLRRALAGLEQ
QQALEVILGRLKETSSNVEFLMQVQKSMPTPNGSDKDH
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
ctgaccacccttcgcgtcgccgagcttcaggctctggcgggcgaactgggtatccagggc
gcatccaaacttcgtaaaggagagctcgtggacgcaatcaccgcgaaccagtcccacacg
accgagtcggctgcagctaccgacgccgccgtcatcgacaccgccgtcactgacgtaccc
gcgcaggctgccccggtagaggccgccgctgtcgtcaccgacgcccccgccgagaccgcg
cccaagaagcgggtctcccgccgggtgagcaccgccacgtcggctcccgccgtcgcccac
gtcaacgccgacggagatctgggcctcggcctgatcgtcccggagaccgcgaagacccgc
aagaccacggcccccaccacctacgccggtgccaccgacaacatcgtcgccgacgcaccc
gtcgtggagaagccggtccgccaggcccgcaagcgcgccagcaccgccaccatcaccgag
gccgccatcgccgaggccgtcgcaaccgcgaacgccgccgaggccgctgctccggtcgcc
gagaccaccgcagccgtcgccgccccggccgcagagcccgccaccgagacgcaggccggt
tccggccgcaaccgtcgcggcaacggtcgcaacgagaaccgcaacgaatcgcggaacgaa
aaccgcaacgaatcgcgcaacggcggacgcaacggcggcaacaaccgcaacaacaacaac
aacagcgccgccaccgcccgcaacgccttcgatgcgcgcagcatgatcgacgcccagaac
gccgaagacggctacgaggctcctgaagaactcgaagccgcaccggccgcgaccgactcg
gccgactccgccgagagcaccgagtcgcgcatccagcgtccggagggcgtcgtgcgtgcc
gaacgctccgagcgtggcggacgccagcgcaaccagcgcggtgcacgcgccgagcagcct
gagcaggccgaaccgaccgagcaggttgaaccggctgagcaggtcgaaccggccgagcag
tccgacagcagctccaccgagcagtccgacgagcaggccgagcagccccgccagggacgc
agccgcaaccgcagccgcggcggcgaccgcaaccagcagggcgaccgcaaccagggcgac
cgtggccaggctgaccgtgcccagggtgaccgtgccccgcagacgtcggatgaccgtggt
gccgagcgtggcgacgaccgccagcagaaccagcgccaggccggcaaccgcggccaggac
cgccagcagcaggatcgccagcagcaggaccgccagggcgaccgccagcagagcgatcgc
gcccagcaggaacgccagggccaggaccgcaaccagggcctggaccgcaactccggcccg
gaggacgagctgaacggtcgcaacaaccgcagccgtttccgtgaccgcaagcgtcgcggc
gccaccgccaacgacgacttcgagcccgagctgaccgacgatgacgtgctcatcccggtc
gccggcatcctcgacgtgctcgacaactacgccttcgtgcgcacctccggctacctgccg
ggtgccagcgacgtctacgtctcgctcggccaggtcaagaagtacaacctgcgcaagggc
gacgccgtcgtcggctcgatccgtcagccgcacgagggtgaccagaacggtcgccagaag
tacaacgcgatcgtcaaggtcgactccatcaacggcctgaccgtcgaggaagccgccagc
cgcgtcgagttccagaagctcaccccgctctacccgcaggagcgactgcgcctcgagacc
gagccgggcaagctgacccagcgcatcatcgacctcgtcgccccgatcggtaagggccag
cgcggcctgatcgtcgcgccgcccaaggccggcaagaccatcgtcatgcagcagatcgcc
aacgccatcgccacgaacaaccccgaggtccacctcatggtcgtcctggtcgacgagcgc
cccgaagaggtcaccgacatgcagcgcacggtgaagggtgaggtcatcgcctccaccttc
gaccgtcccgccgaggaccacaccacggtcgccgaactggccatcgagcgcgccaagcgt
ctcgtcgagctgggtcacgacgttgtcgtgctgctcgactcgatcacccgtctgggccgt
gcctacaacctgacggccccgccgagcggccggatcctctccggcggtgtcgacgcatcc
gcgctgtacccgcccaagcgtttcttcggcgctgcccgcaacatcgagaacggtggctcg
ctcaccatcctcgcctccgcactggtggagaccgggtccaagatggacgaggtcatcttc
gaggagttcaagggcaccggcaacatggagctgcgcctgtcgcgccacctggccgacaag
cggatcttcccggccgtcgacgtcaacgcatccggcacccgccgcgaagaaatgctgatg
agcgccgatgaggtcaagatcacctggaagctgcgccgtgcgctggccggactcgaacag
cagcaggctctcgaggtcatcctgggccggctgaaggagacctcgtccaacgtcgagttc
ctgatgcaggttcagaagtcgatgccgaccccgaacgggtcagacaaggatcactga
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