Cryobacterium sp. LW097: B7495_05220
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Entry
B7495_05220 CDS
T04908
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cry
Cryobacterium sp. LW097
Pathway
cry03420
Nucleotide excision repair
cry03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cry00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B7495_05220
03430 Mismatch repair
B7495_05220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cry03400
]
B7495_05220
Enzymes [BR:
cry01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B7495_05220
DNA repair and recombination proteins [BR:
cry03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B7495_05220
MMR (mismatch excision repair)
Other MMR factors
B7495_05220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
ASD21566
UniProt:
A0AAC9SUE9
LinkDB
All DBs
Position
1121172..1124594
Genome browser
AA seq
1140 aa
AA seq
DB search
MSTPSSQNRAVSALDIAAALKMFPPTGEQQAVIEAPLTPTLVVAGAGSGKTETMANRVLW
LLANGHARPDQILGLTFTRKAAGELAERINDRIRQLSEAGLMPTSADADTAPPAPGSMHS
LDSADLFNAPAVSTYNSFASRLFTDNALLLGREPESVLLSETSAWLLARRVVVANGDGRL
VQFGKGVDAVTDAVLSLSRALAENPPPFVPGEEPVPHDLARLANSFGYLADLPFGNPRKK
KAYDSVLEAISAVAPLPVLAELADAYGAEKRRQGLIEFSDQVALALQVCRKVPAVVARYR
EQYRIVLLDEYQDTSVLQTELLRTLFAHHPVMAVGDPHQSIYGWRGASSANLLGFSTDFA
ALANTEAPSMSLSFTWRNPVTVLETANALVAPLSAQLRARPNGIQVETLKVPPGKAAGRV
DAAMYESIADEAAAIARWFAARLGTAPAGVDAEPESGAMLFRARRDMEFYAEVLREHGVP
AHVLGLGGLLSTPEVADVLAVLRVVHDPSAGSDLIRLLTGGRWRIGVRDLQALSGVAGWL
ATHDWAQKAVTDELKAKLRASVATEESRSLVDALDFVASAPESHGQLAAFSDDGRQRLRQ
AGRQLAWLRSRSGLGLLDFVRLIEQETLLDLELVANESHGRALANLYAFHDAVSAFLDSD
EQGTLASFLRWLARAERQDDLGPRGEAAEPGTVQLLTIHGSKGLEWDYVAIPGLTEKNLP
APSREVSGWLRFGELPYPCRGDRAELPELKRLGHETQMSFDIDFELYKEQLADRHDAEER
RLIYVATTRAQQQLLLTGAFWGGGTTVRKASRYLLELAEAGLIDALPEGSEFDEKPQTDQ
DATEVWPFDPLGTRRPVVEAAAALVRAHDDTGTDAEDDGARIETPWSREVTLLLAERAQR
LAGPGVLGVPTRIPASRFKDYVDDPAAVLARLRRPMPERPYRATRLGTLFHSWVEQRSTG
ASAGDLIDVGPDELDVDPDTDIDIDTGDGMPLELEQLDRFKATFERSPWATLAPEEVEIE
IHHVLGDQVFICKLDAVYKTPTGYQVVDWKTGKAPKDAADLELKQTQLALYRLAYARWKG
IDPASVDAVFYFVADDRIVAPERLYSEEDLLAAWSSVAGSSARPSAVPSTVGIGPVESSP
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgagtaccccgtcttctcagaacagggcggtctccgccctcgacatcgccgcggcgctg
aagatgttcccgcccacaggcgagcagcaggccgtgatcgaggcgcccctcacgcccacc
ctggtggtggccggtgccggcagtggcaagaccgagaccatggccaaccgggtgctctgg
ctgctggccaacgggcatgccaggccggaccagatcctcgggctcaccttcacccgcaag
gccgccggcgagctcgctgaacgcatcaacgatcgcatccgccagctcagcgaggccggg
ctgatgcccacgagcgccgatgcggataccgcaccgccggctcccggctccatgcatagc
ctcgactccgccgacctgttcaacgcccccgcggtctccacctacaactcgttcgccagc
cggctgttcaccgacaacgcgctgctgctcggccgcgaacccgaatcggtgctgctcagc
gaaaccagcgcctggctgctcgcccgccgggtggtcgtggccaacggcgacggccggctc
gtgcagttcggcaagggcgtcgacgccgtcaccgacgctgtgctctcgctcagccgcgcc
ctggccgagaacccgcccccgttcgtgcccggcgaggagccggtgccgcacgacctcgcg
cgcctggcgaacagcttcggctacctcgccgacctgcccttcggtaacccgcgtaagaag
aaggcctacgactcggtgctggaggccatcagcgccgtcgctccgttgccggtgctggcc
gagctggcggatgcctacggggccgagaaacgccgccagggcctgatcgaattctccgat
caggtggccctggccctgcaggtctgccgcaaggtgccggccgtggtggcccgctaccgc
gagcagtaccgcatcgtgttgctcgacgagtaccaggacacctcggtgctgcagaccgag
ctgttgcgcaccctgttcgcccaccacccggtgatggccgtcggcgacccgcaccagtcc
atctacggttggcggggcgcgagctccgcgaacctgctcggcttctccaccgacttcgct
gctctggccaacaccgaggcgccgtcgatgtcgctctcgttcacctggcgcaacccggtc
accgtgctcgagaccgccaacgccctggtcgcgcccctgagcgcgcagctgcgcgcccgg
cccaacggcattcaggtggagaccctcaaggtgccgccgggcaaggccgccggccgagta
gacgcggcaatgtacgagagcatcgccgacgaggccgccgcgatcgcccgctggttcgcc
gccaggctcggcacggcgccggccggcgtggatgctgagcccgagtctggcgcgatgctg
ttccgcgcccgccgcgacatggagttctacgccgaggtgctgcgcgaacacggtgtgcct
gcgcatgtgctcggcctcggcggcctgctgtcgaccccggaagtggccgacgtactcgcc
gtgctacgcgtggtgcacgacccgtccgccggcagcgacctgatccggctgctcaccggc
ggccgctggcggatcggcgtgcgcgacctgcaggccctctccggtgtggcgggctggctg
gccacgcacgactgggcgcagaaggccgtgaccgacgaactcaaggccaagctgcgcgcc
tccgtggccaccgaggagagccggtcgctcgtggacgcgctggattttgtggcctccgca
cccgaatcgcacggccaactggccgccttcagcgacgacggccggcagcgcctgcgccag
gccggccggcagctggcctggctccgcagccgttcgggcctgggcctgctcgacttcgtg
cgtttgatcgaacaggaaaccctgctcgacctggaactggtcgccaacgagagccacggc
cgggccctggccaacctgtatgccttccacgatgccgtttcggcgttcctggacagcgac
gagcagggcaccctggccagcttcctgcgctggctggcccgcgccgaacgccaggacgac
ctcggcccgcgcggcgaggccgccgaaccgggcacggtgcagctcctcaccatccacggc
tccaagggactggagtgggactatgtggccatccccggcctcaccgagaagaacctgccc
gccccgtcccgcgaggtctccggctggttgcgcttcggtgaactgccctacccctgccgg
ggcgaccgggcggagctgccggaactcaaacgcctcggccatgagacccagatgtcgttc
gacatcgatttcgagctgtacaaagagcagctcgccgaccggcacgacgccgaggaacgc
cggctgatctacgtggccaccacccgcgcccagcagcagttgctgctcaccggcgcgttc
tggggcggcggcacgaccgtgcggaaggccagccggtacctgctcgaactggccgaggcg
ggtctcatcgacgccctgccggagggcagcgagttcgacgagaagccgcagacggaccaa
gacgccaccgaggtgtggccgttcgacccgctcggcacccgccgccccgtggtcgaggcc
gccgctgccctggtgcgcgcgcacgatgacacgggcacggatgccgaagacgacggcgcc
cgcatcgaaacgccctggtctagggaggtgaccctgctgctggccgaacgcgcccaacgc
ctggccggacccggcgtcctcggcgtgcccacccgcatcccggcctcccggttcaaggac
tacgtcgacgaccccgccgcggtgctcgccaggctgcgccggccgatgccggagcgccca
taccgggccacccgcctgggcaccctgttccattcctgggtcgaacagcgctccaccggc
gcgtcggccggcgacctcatcgacgtcgggccggacgaactcgacgtggaccccgacacc
gacatcgacatcgacaccggtgacgggatgccgctcgagctggaacagctggaccggttc
aaggccaccttcgagaggtcaccctgggcgacgttggcacccgaggaggtggagatcgag
atccaccacgtgctgggtgatcaggtcttcatctgcaaactcgacgccgtctacaagacc
cccaccggctatcaggtggtggactggaagaccggcaaggcgcccaaggacgccgccgac
ctcgaactcaagcagacccagctggccctgtaccggctcgcttacgcccgctggaagggc
atcgacccggccagcgtcgacgctgtcttctacttcgtcgcggacgaccgcatcgtcgca
cccgagcggctctactcggaggaggaccttctggcggcgtggtcgtcggtggccgggtcg
tccgcgcggccgtctgccgtgccgtcgaccgtggggatcggacccgtcgagtcgtcgccg
taa
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