Cryobacterium sp. LW097: B7495_06530
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Entry
B7495_06530 CDS
T04908
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cry
Cryobacterium sp. LW097
Pathway
cry03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cry00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B7495_06530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cry03019
]
B7495_06530
03009 Ribosome biogenesis [BR:
cry03009
]
B7495_06530
Enzymes [BR:
cry01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
B7495_06530
Messenger RNA biogenesis [BR:
cry03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B7495_06530
Ribosome biogenesis [BR:
cry03009
]
Prokaryotic type
rRNA helicases
B7495_06530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UvrA_inter
adh_short
HEM4
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ASD21792
UniProt:
A0AAC9SXI6
LinkDB
All DBs
Position
complement(1426073..1427911)
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AA seq
612 aa
AA seq
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MTPPDSTAPTEAATARPTITFSELGLSDSVLKALKDVGYETPSAIQAATIPPLLDGRDVV
GLAQTGTGKTAAFALPILSRLDMSQKSPQALVLAPTRELALQVCEAFEKYAAHMKGVHVL
PVYGGQGYGIQLSALRRGVHVVVGTPGRIMDHLEKGTLDLTQLKYLVLDEADEMLKMGFA
EDVETILADTPDDKQVALFSATMPAQIRRISKQYLNDPEEITVKNKTTTSVNTTQRYLLV
SYPQKVDALTRILEVENFEGMIVFTRTKNETETLAEKLRARGYSATAINGDVPQVQRERT
VEQLKSGKLDILVATDVAARGLDVERISHVINYDIPIDTESYVHRIGRTGRAGRSGAAIS
FVTPRERHLLNAIERATRQPLTQMQLPSVEDVNVTRLARFDDAITAALEETARIAAFRDI
VGHYVEHHDVPEADVAAALAVVAQGETPLLLNADDVRAAARFDRERTEHRDRDRPARNDR
RDDRGSRDDRGSRDDRPLRSERPERRSRDSSRAMASYRIEVGKRHKVEPRQIVGALANEG
GLSREDFGAIQILPEYSLVDLPADLTSDVLGRLSATRISGKLIEIHADNGASAGRNDRPQ
QGDRSERPPRRY
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgacgcctcctgattcaactgcaccgaccgaggcagccactgcccgcccgaccatcacg
ttctccgagcttgggctcagtgactccgtactcaaagccctcaaagacgtaggctacgag
actccgtcggccatccaggctgccaccattccgccgctcctcgacggccgcgacgtcgtc
ggactcgcccagaccggcaccggcaagacggccgccttcgcgttgccgatcctctcccgc
ctcgacatgtcccagaagagcccgcaggccctggtgctcgcccccacccgcgaactcgcc
ctgcaggtctgtgaggccttcgagaagtacgccgcccacatgaagggcgtgcacgtgctg
cccgtctacggcggacagggttacggcatccagctgtcggcgctgcgccggggcgttcat
gttgtcgtcggtactcccggccgcatcatggaccacctcgaaaagggcaccctcgacctc
acccagctcaagtacctggtgctcgacgaggccgacgagatgctcaagatgggcttcgcc
gaagacgtcgagacgatcctcgccgacaccccggacgacaagcaggtggccctgttctcc
gccaccatgcccgcgcagatccgtcgcatctccaagcagtacctcaatgaccccgaagag
atcacggtcaagaacaagaccacgacctcggtcaacaccacccagcgttacctgctggtc
tcctacccgcagaaggtggacgcgctcacccgcatcctcgaggtggagaacttcgagggc
atgatcgtcttcacccgcaccaagaacgagaccgagacgctcgccgagaagctgcgtgca
cgtggctactccgccaccgccatcaacggcgacgtgccccaggtgcagcgtgagcgcacc
gtggagcagctcaagagcggcaagctggacatcctcgtcgccacggatgtcgccgcccgc
ggcctcgacgtggagcgcatcagccacgtcatcaactacgacatcccgattgacaccgag
tcgtacgtgcaccgcatcggccgcaccggccgcgccggccgcagcggcgccgcgatcagc
ttcgtcacccctcgtgagcgtcacctgctcaacgccatcgagcgggccacccgccagccg
ctcacccagatgcagctgcccagcgtcgaagacgtcaacgtcacccggctcgcccggttc
gacgacgcgatcaccgctgcgctggaggagaccgctcgcatcgccgcgttccgcgacatc
gtgggccactacgtggagcaccacgacgtgcccgaggccgacgtcgccgccgcactcgcc
gtggtcgcccaaggagagaccccgctgctgctcaacgccgacgacgtgcgtgctgcggcg
cgtttcgaccgggagcgcaccgagcaccgcgaccgcgaccggcccgcacgcaacgaccgt
cgggacgaccggggcagccgcgatgaccgcggcagccgggatgaccgcccgctgcgcagc
gaacgccccgaacgccgctcacgcgacagcagccgcgccatggcctcgtaccgcatcgag
gtcggcaagcgtcacaaggtggaaccacgccagatcgtcggcgctctcgccaacgagggt
ggcctgagccgggaagacttcggcgcgatccagatcctgcccgagtactccctggtggac
ctgcccgccgacctgaccagcgatgtgctgggccgcctctcggcgacccgcatcagcggc
aagctgatcgagatccacgccgacaacggcgcctcggccggccgcaacgaccggcctcaa
cagggcgaccgctccgagcgcccgccgcgccgctactag
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