Cryobacterium sp. LW097: B7495_08340
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Entry
B7495_08340 CDS
T04908
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
cry
Cryobacterium sp. LW097
Pathway
cry02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cry00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
B7495_08340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cry03021
]
B7495_08340
Transcription machinery [BR:
cry03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
B7495_08340
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
ASD22102
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All DBs
Position
1810837..1812177
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AA seq
446 aa
AA seq
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MATPTKTEPELKTTETQPADDATVTAAKTPAQKAAATRAATAAAKAAAAAAGADAPEKAA
PRKRAASTKTKAPVGKKKAGDAEAGDDEAVAPGDEHDTDDDDTTDGAAKRVAPAEPLPSG
ALVLSLVDDEDEVPVYSSAITGATADPVKDYLKQIGKVALLNAAEEVELAMRIEAGLFAE
DKLSQMTDAEKKSALGRELQWVAKDGARAKSHLLGANLRLVVSLAKRYTGRGMQFLDLIQ
EGNLGLIRAVEKFDYTKGFKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLARV
QRQMLQDLGREPTPEELSRELDMTPEKVVEVQKYGREPISLHTPLGEDGDSEFGDLIEDT
EAVVPADAVGFTMLQKQLESLLDSLSEREAGVIRMRFGLGDGMPKTLDQIGDTFGVTRER
IRQIESKTMAKLRHPSRSQSLRDYLE
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccccaacgaagacagagcccgaattgaagaccaccgagacccagccggccgac
gacgcaaccgtcaccgcggccaagacgcccgcacagaaggccgctgcgacgcgcgcagcc
acggccgccgccaaggcagccgccgccgcggccggtgccgacgccccggagaaggccgca
ccacgcaagcgcgccgcgagcacgaagaccaaggcgccagtgggaaagaagaaggccggc
gatgccgaagccggcgacgacgaggccgtcgctcccggtgacgagcacgacaccgatgat
gacgacaccaccgacggcgctgccaagcgcgtcgcccctgccgagccgctgcccagcggt
gcgctcgtgctgtccctcgtcgacgacgaggatgaggtaccggtctactcgagcgccatc
accggcgcgacggcggacccggtcaaggactacctgaagcagatcggcaaggtcgcgttg
ctcaacgccgccgaagaagtcgaactggccatgcgcatcgaggcgggcctgttcgccgaa
gacaagctctcccagatgaccgacgccgagaagaagagcgcgctcggacgcgaattgcag
tgggtcgccaaggacggcgcccgcgcgaagagtcacctgctcggcgccaacctgcgtctg
gtcgtctccctggccaagcggtacaccggtcgtggaatgcagttcctggacctgatccag
gagggcaacctgggcctcatccgtgcggtcgagaagttcgactacaccaagggcttcaag
ttctccacctatgcgacctggtggatccgccaggccatcacgcgcgccatggccgaccag
gcccgcaccatccgtatcccggtgcacatggtcgaggtcatcaacaagctcgcccgtgtg
cagcgccagatgctgcaggacctcggtcgcgaacccacgccggaggaactgagccgcgag
ctcgacatgaccccggaaaaggtcgtcgaggtgcagaagtacggccgcgagccgatctcc
ctgcacaccccgctcggcgaggacggcgacagcgagttcggcgacctgatcgaggacact
gaagcggtggttcccgccgatgccgtgggcttcacgatgctgcagaagcagctggaaagc
ctgctcgactccctctccgaacgcgaagccggcgtcatccggatgcgcttcggcctgggc
gacggcatgccgaagaccctcgaccagatcggcgacaccttcggcgtcacgcgtgagcgg
attcgtcagatcgagtccaagaccatggccaagctgcgccacccgtcccggtcgcagtcg
ctgcgcgactacctcgagtaa
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