KEGG   Cryobacterium sp. LW097: B7495_08340
Entry
B7495_08340       CDS       T04908                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
cry  Cryobacterium sp. LW097
Pathway
cry02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:cry00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    B7495_08340
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cry03021]
    B7495_08340
Transcription machinery [BR:cry03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     B7495_08340
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2
Other DBs
NCBI-ProteinID: ASD22102
LinkDB
Position
1810837..1812177
AA seq 446 aa
MATPTKTEPELKTTETQPADDATVTAAKTPAQKAAATRAATAAAKAAAAAAGADAPEKAA
PRKRAASTKTKAPVGKKKAGDAEAGDDEAVAPGDEHDTDDDDTTDGAAKRVAPAEPLPSG
ALVLSLVDDEDEVPVYSSAITGATADPVKDYLKQIGKVALLNAAEEVELAMRIEAGLFAE
DKLSQMTDAEKKSALGRELQWVAKDGARAKSHLLGANLRLVVSLAKRYTGRGMQFLDLIQ
EGNLGLIRAVEKFDYTKGFKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLARV
QRQMLQDLGREPTPEELSRELDMTPEKVVEVQKYGREPISLHTPLGEDGDSEFGDLIEDT
EAVVPADAVGFTMLQKQLESLLDSLSEREAGVIRMRFGLGDGMPKTLDQIGDTFGVTRER
IRQIESKTMAKLRHPSRSQSLRDYLE
NT seq 1341 nt   +upstreamnt  +downstreamnt
atggcaaccccaacgaagacagagcccgaattgaagaccaccgagacccagccggccgac
gacgcaaccgtcaccgcggccaagacgcccgcacagaaggccgctgcgacgcgcgcagcc
acggccgccgccaaggcagccgccgccgcggccggtgccgacgccccggagaaggccgca
ccacgcaagcgcgccgcgagcacgaagaccaaggcgccagtgggaaagaagaaggccggc
gatgccgaagccggcgacgacgaggccgtcgctcccggtgacgagcacgacaccgatgat
gacgacaccaccgacggcgctgccaagcgcgtcgcccctgccgagccgctgcccagcggt
gcgctcgtgctgtccctcgtcgacgacgaggatgaggtaccggtctactcgagcgccatc
accggcgcgacggcggacccggtcaaggactacctgaagcagatcggcaaggtcgcgttg
ctcaacgccgccgaagaagtcgaactggccatgcgcatcgaggcgggcctgttcgccgaa
gacaagctctcccagatgaccgacgccgagaagaagagcgcgctcggacgcgaattgcag
tgggtcgccaaggacggcgcccgcgcgaagagtcacctgctcggcgccaacctgcgtctg
gtcgtctccctggccaagcggtacaccggtcgtggaatgcagttcctggacctgatccag
gagggcaacctgggcctcatccgtgcggtcgagaagttcgactacaccaagggcttcaag
ttctccacctatgcgacctggtggatccgccaggccatcacgcgcgccatggccgaccag
gcccgcaccatccgtatcccggtgcacatggtcgaggtcatcaacaagctcgcccgtgtg
cagcgccagatgctgcaggacctcggtcgcgaacccacgccggaggaactgagccgcgag
ctcgacatgaccccggaaaaggtcgtcgaggtgcagaagtacggccgcgagccgatctcc
ctgcacaccccgctcggcgaggacggcgacagcgagttcggcgacctgatcgaggacact
gaagcggtggttcccgccgatgccgtgggcttcacgatgctgcagaagcagctggaaagc
ctgctcgactccctctccgaacgcgaagccggcgtcatccggatgcgcttcggcctgggc
gacggcatgccgaagaccctcgaccagatcggcgacaccttcggcgtcacgcgtgagcgg
attcgtcagatcgagtccaagaccatggccaagctgcgccacccgtcccggtcgcagtcg
ctgcgcgactacctcgagtaa

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