Cryobacterium sp. LW097: B7495_09400
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Entry
B7495_09400 CDS
T04908
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
cry
Cryobacterium sp. LW097
Brite
KEGG Orthology (KO) [BR:
cry00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cry03016
]
B7495_09400
Enzymes [BR:
cry01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
B7495_09400
Transfer RNA biogenesis [BR:
cry03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
B7495_09400
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Doppel
DUF2321
Motif
Other DBs
NCBI-ProteinID:
ASD23992
UniProt:
A0AAC9X7D1
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All DBs
Position
2035532..2036728
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AA seq
398 aa
AA seq
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MVTHQVIDSRAAYLAALDVLAQGTGPIGIDAERASGFTYSQRAYLIQIFRRDAGTFLFDP
PAIGDFSELNDALADEEWILHAASQDLACLREVGLDPTRIFDTELAARLLGLPRVGLGTV
VEELLGIHLAKEHSAANWSTRPLPESWLVYAALDVELLPDLRDSMVDLLVESGKTEIADQ
EFAAVLAKEAKPARAEPWRRLSGLHAVRGQRNLAVARELWVARDTLAQELDVSPGRLVPD
ASLVAAARLLPANRNVLAELREFNGRASRTELDRWWQAILRGLASVDLPSVKANGDALPP
PRAWADRNPDADLRYKAARAALTAASEERAVPLENLLTPDHLRRVAWQPPEPAGADAVGE
ALAGLGARTWQIEATAQLIADAFVEVHQSASVAADAES
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
gtggtcacccaccaggtcatcgactcccgcgcagcctatctggcggcactcgacgtgctc
gcccagggaaccgggccgatcggcatcgatgcggaacgggcatcgggtttcacctactcc
cagcgtgcttacctgatccagatcttccgccgggatgcgggcaccttcctgttcgatcca
ccggctatcggcgacttcagcgaactcaacgacgccctcgccgacgaggaatggatcctg
cacgcagcaagtcaagatctcgcctgcctccgcgaggtcggcctcgaccccacccgcatc
ttcgacaccgagctcgccgcacgcctgctcggcctgccccgcgtgggactcggcaccgtg
gtcgaagaactcctcggcattcacctagccaaagaacactccgccgccaactggtcaacc
cggccgttgcccgaaagctggctggtctacgcagccctggacgtggagctactcccggac
ctccgtgacagcatggtcgacctgctcgtggaatccggcaagaccgagatcgccgaccag
gagttcgccgcggtactggccaaggaagcgaagccggcccgcgcggagccctggcgccgc
ctgtccggcctgcacgccgtgcgtggccagcgcaacctggccgtggcccgcgagctgtgg
gtcgccagggacaccctcgcccaggagctcgacgtctcccccggccgtttggttcccgac
gcgtcgctcgtggccgcagcacgtctgctgcccgcgaaccggaacgttctcgccgagctt
cgcgagttcaacggtcgcgccagccgaaccgagctcgacaggtggtggcaggccatcctg
cgtggcctcgccagcgttgacctgccctcggtgaaggcgaacggcgacgcactgccgccg
ccccgcgcctgggctgaccgcaatcccgacgccgacctgcggtacaaggccgcgagggcc
gccctgacggcggcctcggaggagcgcgcggtgccgttggagaacctcctcactcccgac
cacctgcgtcgcgtggcttggcagccgccggagcctgccggtgccgatgccgtgggcgag
gccctcgccggtctcggtgcgagaacctggcagattgaggccactgcacaactaatcgct
gatgcctttgtggaagtccaccaaagcgcgtccgttgccgccgacgctgagtcgtag
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