Cryobacterium sp. LW097: B7495_09625
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Entry
B7495_09625 CDS
T04908
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
cry
Cryobacterium sp. LW097
Pathway
cry03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cry00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B7495_09625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cry03019
]
B7495_09625
03009 Ribosome biogenesis [BR:
cry03009
]
B7495_09625
Enzymes [BR:
cry01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
B7495_09625
Messenger RNA biogenesis [BR:
cry03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
B7495_09625
Ribosome biogenesis [BR:
cry03009
]
Prokaryotic type
rRNA processing factors
B7495_09625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
Motif
Other DBs
NCBI-ProteinID:
ASD22315
LinkDB
All DBs
Position
complement(2081899..2084565)
Genome browser
AA seq
888 aa
AA seq
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MVEDNDNKKRKGLFGTRKTTRKAAPAKQLEPIGDTPRVPVQDDPAVTPESPSASADRVAS
DQVPFGQASSDQAAAAADQPVAFPALPTPFDETVEVVRRPTTSLIFQAPAILPAPVRSGG
RQLDDEDDDPEEGSTVRRRARRRTGEEGRSDDPANTVVRVRTPREPELITEPQRIKGSTR
LEAKKQRRRDGRDAGRRRPVITEAEFLARRESVDRAMVVRAKHNKIQIGVLEDGVLVEHY
VAKNQDASLIGNVYLGRVQNVLPSMEAAFVDIGRGRNAVLYSGEVDWDAAAVNSPGASQT
RRIELALKPGDKVLVQVTKDPIGHKGARLTSQVSLPGRYLVYVPNGSMNGISRKLPDTER
ARLKKILKEVLPDNVGVIVRTAAEGATDEQLTLDVNRLTAQWASIAKQVETVSGPALLHS
EPDLLIKIVRDVFNEDFHKMVISGDDAQEVIESYLRQVAPDLVERVQRYEGERDAFDEYR
ISEQIEKALDRKVWLPSGGSLVIDRTEAMTVVDVNTGKFVGSGGNLEETVTKNNLEAADE
IVRQLRLRDIGGIIVVDFIDMVLESNRDLVLRRLVECLSRDRTKHQVAEVTSLGLVQMTR
KKLGLGLLESFSENCEACAGRGIVIHHDPVVKHRQTAQPTQERRPRSKSNGNGGSGHDAG
NSGQRGNGNQNSGQAHGAPVQTDATKAGHGTHGITEDAKHALALIAARTISRSLTGSIPV
LAPTETAAPAAAPAAEADAPTAAESVDTAPTARSNSRGNRSGSRSGGRTGQSTDSAPVVQ
PDRASTDPFGAEPETAAPAVQAPLLAPEAVPADSADGVAILDIPVQKSPRSRRPVSKQVT
DQLLDSVLEALPEPKQPGQGRSRSRRVTTAGGPTATVQPIVAPTQDNA
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggtggaagacaacgacaacaagaagcgcaagggcctgttcggcactcgcaaaacaacc
aggaaggcggcaccggccaagcagctcgaaccgatcggtgacacgccccgtgtacccgtt
caggacgacccggccgtgacgccggagtcaccgtcggcttcggccgaccgagtggcttcc
gaccaggtgccgttcggccaggcctcgtccgaccaggcggcagccgcggcggaccagccg
gtggcattccctgccctgccgacacccttcgacgagaccgtcgaggtcgttcgccggccg
acgacgtccctgatcttccaggccccggcgattctgccggccccggtccggtccggcggc
cgtcagctcgacgacgaggatgacgaccccgaagagggctcgacggtgcgccgtcgcgcg
cgccgtcgcaccggtgaagaaggccgcagcgacgaccccgccaacaccgtggtgcgggtg
cggactccgcgcgaacccgagctgatcaccgagccccagcggatcaagggctccacccgc
ctggaggccaagaagcagcgccgccgcgacggccgcgacgccggccgccgccgccctgtc
atcacggaggccgagttcctcgcccgccgcgagtcggtcgaccgcgccatggtcgtgcgg
gccaagcacaacaagatccagatcggcgttctcgaagacggagtgctcgtcgagcactac
gtggccaagaaccaggatgcgtcgctcatcggcaacgtctacctcggtcgtgtgcagaac
gtgttgccgagcatggaagccgccttcgtcgacatcggccgcggccgcaacgccgtgctc
tactccggtgaggtcgactgggacgccgccgcggtgaactccccgggtgcgagccagact
cgccgtatcgagctggcgctcaagcccggcgacaaggtgctggtgcaggtcaccaaggac
ccgatcggtcacaagggcgcccggctcaccagccaggtgtcgctgcccggccgctacctc
gtctacgtgcccaatgggtcgatgaacggcatcagccgcaagctgcccgacactgagcgc
gccaggctgaagaagattctcaaggaggtccttccggacaacgtgggtgtcatcgtgcgc
accgcagccgagggcgcgaccgacgaacagctcaccctcgacgtcaaccgcctcaccgcg
cagtgggcctccatcgccaagcaggttgaaacggtgtccggtccggccctgttgcacagc
gagcctgatctgctgatcaagatcgtgcgtgacgtcttcaacgaggacttccacaagatg
gtcatctccggcgacgacgcccaggaggtcatcgagtcctacctgcgccaggtggctccc
gacctcgtcgagcgcgtccagcgctacgagggcgagcgcgacgcgttcgacgaataccgc
atctcggagcagatcgaaaaggcactggaccgcaaggtctggctgccgtcgggcggttcg
ctcgtgatcgaccgcaccgaggcgatgaccgtcgtcgacgtcaacaccggcaagttcgtc
ggatccggcggaaacctcgaggagaccgtcaccaagaacaacctcgaagcagccgatgag
atcgttcggcagctgcgcctgcgcgacatcggcggcatcatcgttgtcgacttcatcgac
atggtcctggagtccaaccgtgacctggtgctccgtcgcctggtcgagtgcctcagccgc
gaccgcaccaagcaccaggtggccgaggtcacctcgctcgggctcgtgcagatgactcgc
aagaagctcggcttgggcctgctcgaatcgttcagcgagaactgcgaggcctgcgccgga
cgtggaatcgtcatccaccacgaccccgtcgtcaagcaccgccagaccgctcagcccact
caggagcgccgcccccgcagcaagtccaacggcaacggcggctccggccacgacgccggc
aactccggtcagcgcggcaacggcaaccagaattccggtcaggcgcatggtgcgcccgta
cagacggatgccaccaaggccggccacggcacgcacggaatcaccgaggacgccaagcac
gccctcgcgctgatcgccgcgcgcaccatcagccgctcactgaccggttcgatccccgtg
ctcgcgccgaccgagacggctgccccggccgccgccccggctgctgaggccgacgccccg
accgcggccgagagcgtcgacaccgcgcccacggcccgttcgaactcccggggcaaccgt
tcgggcagtcgttcggggggccgcaccggccagtcgaccgacagtgcgcccgtcgtgcag
cccgaccgggcgtccaccgacccgttcggcgcagagcccgagaccgccgccccggcggtt
caggcgcctctcctggctccggaggccgtgccggccgactcggccgacggtgtcgctatt
ctcgacatccccgtgcagaagtcaccgcgcagccgccgtccggtgagtaagcaggtcacc
gaccagctgctcgattcggtgcttgaagccctgccggagcccaagcagcccggccagggt
cgttcgcgcagccgtcgggtcaccaccgccggcggtccgaccgccaccgtgcagccgatc
gtggctcccacgcaggacaacgcctaa
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