Cryobacterium sp. LW097: B7495_12110
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Entry
B7495_12110 CDS
T04908
Name
(GenBank) recombinase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cry
Cryobacterium sp. LW097
Pathway
cry03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cry00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B7495_12110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cry03019
]
B7495_12110
03400 DNA repair and recombination proteins [BR:
cry03400
]
B7495_12110
Enzymes [BR:
cry01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B7495_12110
Messenger RNA biogenesis [BR:
cry03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B7495_12110
DNA repair and recombination proteins [BR:
cry03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
B7495_12110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
ASD22733
UniProt:
A0AAC9X528
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All DBs
Position
2596981..2599155
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AA seq
724 aa
AA seq
DB search
MEPDRDRRVPRRCGLQARRAVTPNTREAALEILRTLVGRPDADFHEGQYEAIETLVDQRR
RALVVQRTGWGKSAVYFVATLLLRRQGAGPTILVSPLLALMRDQVAAAARAGVRAVSINS
ANAHEWTDVLAALRADEVDVLLVSPERLNNPSFRDEQLPALLERVGLLVVDEAHCISDWG
HDFRPDYRRLRDLIAAMPAGVPVLATTATANSRVVTDVAEQVAVGGSDVVTIRGPLARAS
LRLGVLRLPDSRARLAWLLSHLAELPGSGIIYTLTVSAAEDTARLLRDAGHAVRAYTGQT
DTTEREESEGLLKANQVKALVATSALGMGFDKPDLGYVLHLGAPSSPVAYYQQVGRAGRA
TENADVLLLPGVEDEAIWQYFATSSMPSQHKAEAVLQALHANGGAPLSTPALESRVDLRR
SPLELLLKVLDVDGAVRRVTGGWLATGQPWVYDSDRYERIGAARVAEQNAMLDYERISGC
RMEFLQRALDDDTAVPCGRCDNCTAPWYPTDVQADAASTAASALDRVGVALEPRAQWPTG
ADRLGVSAKGRIDAGDRVLPGRALARLTDLGWGNTLRDTFAPNTPDAPASPALLAACVRV
LAEWGWAERPVGVVAMPSRRHPLLVASVAAELSRVGRLPQLGTLSLVGAGPTGESGGNSA
YRLSSVWGAFEVGPELAANLAGADGPVLLVDDLGDSRWTLTVAGRLLRRAGAPGVLPFTL
ALRS
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggagcccgatcgcgaccggcgggttccccgccgatgtggcctccaggctcgacgcgct
gtgacgccgaatacccgcgaggccgccctcgagatcctgcgcaccctggtgggccggccc
gacgccgacttccacgagggccagtatgaggccatcgaaaccctcgtcgaccagcgccgc
cgggccctcgtggtgcagcgcaccggctggggcaagtcggcggtctacttcgtcgcgacc
ctgctgctgcgccgccagggtgccggccccaccatcctggtgtccccgctgctggccctg
atgcgtgaccaggtggccgccgctgcccgcgccggcgtgcgggccgtgtcgatcaactct
gccaacgcccacgagtggaccgacgtgctcgctgcgctccgcgcggacgaggtcgacgtt
ctgctggtctcccccgaacgcctgaacaacccgtccttccgcgacgagcagctgcccgcg
ctgctcgagcgggtggggctgctcgtggtcgacgaggcgcactgcatctcggactggggc
cacgacttccggccggactaccggcgcctgcgggacctgatcgcggcgatgccggccggg
gtgccggtgctggccaccacggccacggccaacagccgggtggtgacggatgtggcggag
caggtagcggtcgggggcagtgacgtcgtcaccatccgcggccccctcgcccgcgcgtca
ctgcgcctgggcgtgttgcgcctgccggactcccgcgcccggttggcctggctgctcagc
cacctcgccgagttgcccggcagcggcatcatctacaccctcacggtctcggccgccgag
gacaccgcccggctgctgcgggatgccggccacgccgtccgtgcgtacaccggccagacc
gacaccaccgaacgcgaggagtccgaggggctgctcaaggccaaccaggtgaaggccctc
gtggccaccagcgccctgggcatgggcttcgacaagcccgacctgggctatgtgctgcat
ctcggcgcccccagcagcccggtcgcctactaccagcaggtcggccgtgccggccgtgcc
actgagaatgccgacgtgttgctgctgccgggtgtcgaagacgaggccatctggcagtac
ttcgccacctcgtcgatgcccagccagcacaaggccgaggccgtgctgcaggcgctacac
gccaacggtggcgccccgctgtccacgcccgccctggagtcccgggtcgacctccggcgt
tccccgctggaactgctgctcaaggtgctcgacgtcgacggcgccgtgcgccgggtgacc
ggcggctggctggccaccggacagccctgggtctacgacagcgatcgctacgaacgcatc
ggcgcggcaagggtggccgagcagaacgccatgctcgactatgaacgcatctccggctgc
cggatggagttcctccagcgcgctctcgacgacgacaccgccgtgccctgcggccgctgc
gacaactgcacggccccctggtaccccaccgacgttcaggccgatgcggcgagcaccgcg
gcctcggccctggaccgggtgggcgtggccctggaaccccgcgcccaatggcccaccggc
gccgacaggctcggcgtgagcgccaagggccgcatcgacgccggcgacagggtgctgccc
ggtcgcgctctggcccgactcaccgacctgggctggggcaacaccctgcgcgatactttc
gcgcccaacaccccggatgcgcccgcctcgccggcgctgctggccgcctgcgtgcgggtg
ctcgccgagtggggctgggccgaacggcccgtgggggtggtggccatgccgtcccgccgg
catccgctactggtggcctcggtggcagccgaactcagccgggtggggcggctgccgcaa
ctgggcacgctgagcctggtgggcgcagggcccaccggcgaatccggcggcaacagcgcc
taccggctctccagcgtctggggtgccttcgaggtcggcccggagctggccgccaacctg
gccggagccgacgggccggtgctgctggtcgacgacctcggcgacagccggtggaccctc
accgtcgccggccggctgctccgccgcgcgggcgcgccgggcgtgctgccgttcacgctg
gcgctgcggtcgtag
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