Chromobacterium rhizoryzae: D1345_00015
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Entry
D1345_00015 CDS
T05688
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
crz
Chromobacterium rhizoryzae
Brite
KEGG Orthology (KO) [BR:
crz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
crz03032
]
D1345_00015 (gyrB)
03400 DNA repair and recombination proteins [BR:
crz03400
]
D1345_00015 (gyrB)
Enzymes [BR:
crz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
D1345_00015 (gyrB)
DNA replication proteins [BR:
crz03032
]
Prokaryotic type
DNA Topoisomerases
D1345_00015 (gyrB)
DNA repair and recombination proteins [BR:
crz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
D1345_00015 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
HATPase_c
Toprim
GyrB_hook
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AXT44688
LinkDB
All DBs
Position
2709..5099
Genome browser
AA seq
796 aa
AA seq
DB search
MSEQEYGADSIKVLKGLDAVRKRPGMYIGDTSDGTGLHHMVFEVLDNAIDEALAGHADTI
KVIINPDNSITVEDNGRGIPTDIHPEEGRSAAEVIMTILHAGGKFDSNSYKISGGLHGVG
VSVVNALSDWLRLKIWRDGKVHEMEFRRGDAVAPLTVTGHTNHRGTEVTFRASEETFGLV
EFHFDILAKRIRELSFLNQGVGINLIDKRSGKEENFAFSGGVAGFVEYMNRNKTVLHPKV
FYGLGEKDGMTVEVAMQWNDSYQESVQCFTNNIPQRDGGTHMTALRQVMTRTLNQYIEES
EVAKKAKVDTTGDDMREGLTCVLSVKLPDPKFSSQTKDKLVSSEIGPVVNEIISEALKSY
LLENPADAKIICGKIVEAARAREAARKAREITRRKGIMDGLGLPGKLADCQEKDPTLCEL
YLVEGDSAGGSAKQGRDRKFQAILPLKGKILNVERARFDKMLQSQEVATLITAMGCGIGK
DEYNPDKLRYHRIIIMTDADVDGAHIRTLLLTFFYRQMSELVERGHIYIAQPPLYKAKLG
KQERYLKDDSELNQFLLQLALEKAELIPAEGAAALSGDTLGEIARQFLLTRSVIERESRV
IDPLVLEAMLKTGPLSLSSQQEADAALAKLSALLPAEAIELELLRDEKNDGHLIKIIRKL
HGNVMVTVMDQDFLESGDYAEMKKTGDMLSGLLREGAHVKRGETVKPVAEFGEALDWLLA
EVKKGMNIQRYKGLGEMNPEQLWETTMDPTVRRLLKVRIEDVMSADDVFTTLMGDEVEPR
RNFIEGNALIARNIDV
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacaggaatacggcgcggatagcatcaaagtcctcaaaggattggatgcggta
cgcaaacgccccggcatgtatattggcgacacctcggacggcaccggcttgcaccacatg
gtgtttgaagtgctggacaacgccattgacgaagcgctggccggccatgccgacaccatc
aaggtcatcatcaaccccgacaactccatcaccgtggaagacaacggccggggcatcccc
accgacatccacccggaagaggggcgatcggcggcggaagtgatcatgaccatcctgcac
gccggcggcaaattcgacagcaacagctacaagatctccggcggcctgcacggcgtgggt
gtgtccgtggtgaacgcgctgtccgattggctgcgcctgaaaatctggcgcgacggcaaa
gtccatgaaatggaattccgtcgcggcgacgccgtggccccgctcaccgttaccggccac
accaaccaccgcggcacggaagtcaccttccgcgccagcgaagaaaccttcggcctggtg
gaattccacttcgacatcctggccaagcgcatccgcgaactgtccttcctgaaccagggc
gtgggcatcaacctgatagacaagcgcagcggcaaggaagaaaacttcgccttctccggc
ggcgtggccggcttcgtggaatacatgaaccgcaacaagaccgtgctgcaccccaaagtg
ttttacggcctgggcgaaaaagacggcatgaccgtggaagtggcgatgcagtggaacgac
tcctaccaggaaagcgtccagtgcttcaccaacaacatcccccagcgcgacggcggcacc
cacatgaccgcgctgcgccaggtgatgacccgcacgctgaaccaatacattgaagagagc
gaagtcgccaaaaaagccaaggtggacaccaccggcgacgacatgcgcgaaggcctgacc
tgcgtgctctccgtcaaactgccggaccccaagttctccagccagaccaaggacaagctg
gtttccagcgaaattggcccggtggtcaacgagatcatcagcgaagcgctgaagagctac
ctgctggaaaacccggccgacgccaagatcatctgcggcaagatcgtggaagccgcccgc
gcccgcgaagccgcgcgcaaggcccgcgaaattacccgccgcaaaggcatcatggacggc
ctgggcctgcccggcaaactggcggactgccaggaaaaagaccccaccctgtgcgaactg
tacctggtggagggcgactccgccggcggctccgccaaacaaggccgtgaccgcaaattc
caggccatcctgccgctgaagggcaagatcctgaacgtggaacgcgcccgcttcgacaaa
atgctgcaaagccaggaagtggccaccctgatcaccgccatgggctgcggcattggcaag
gacgagtacaacccggacaaactgcgctaccaccgcatcatcatcatgaccgatgccgac
gtggacggcgcacacatccgcaccctgctgctcaccttcttctaccgccagatgagcgaa
ctggtggagcgcggccacatctacattgcccagccgccgctgtacaaggccaaactgggc
aagcaagagcgctacctcaaggacgactccgagctcaaccagttcctgctgcaactggcg
ctggaaaaagccgaactgatcccggccgaaggcgccgccgcattgtccggcgacaccctg
ggcgaaattgcccgccagttcctgctgacccgctccgtgattgaacgtgaaagccgcgtg
atagacccgctggtgctggaagccatgctcaagaccggcccgctgtccctcagcagccag
caagaagcggacgccgcgctggctaaactgagcgcgctgttgccggcggaagccatcgaa
ctggaactgctgcgtgatgaaaagaacgacggccacctgatcaaaatcatccgcaaactg
cacggcaacgtgatggtgacggtgatggaccaggactttctggagtccggcgactacgcg
gaaatgaagaaaaccggcgacatgctcagcggcctgctgcgcgaaggcgcccacgtcaaa
cgcggcgaaaccgtgaaaccggtggcggagtttggcgaagcgctggactggctgctggcg
gaagtgaagaagggcatgaacatccagcgctataaaggcctgggcgagatgaacccggaa
cagctgtgggaaaccacgatggaccccaccgtgcgccgcctgctgaaggtgcgcattgaa
gacgtgatgagcgcggacgacgtgttcaccaccctgatgggcgacgaagtggaaccgcgc
cggaacttcatcgagggtaatgccttgattgcgcggaatatcgacgtgtaa
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integrated database retrieval system
