Chromobacterium rhizoryzae: D1345_00035
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Entry
D1345_00035 CDS
T05688
Name
(GenBank) DUF1998 domain-containing protein
Organism
crz
Chromobacterium rhizoryzae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
MZB
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
AXT44692
LinkDB
All DBs
Position
complement(10745..15988)
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AA seq
1747 aa
AA seq
DB search
MPHRPWMHPGDFEVNAQNYSIKSVHETLLKTFHQYLSAQYHIWDEWLISERNRILEEVGN
TFQEPRLEATPHYASGHPYSDLQIPDEAKAILTFASNDASTGIPKMAYSHQCRAIETFVT
GKDLIVATGTGSGKTESFLMPIMSSLAIESTQRPKSWAMPAMRALLLYPMNALVNDQLGR
LRRLFGNQGVREALRGKNKRGPTFGMYTSRSPYPGLRTKKKDRDRVVGELTKLYIEGMTD
NYRERLQKEGKWPSKDLDGFLSRDLKTDPSDTELITRHEMQDAAPDLLVTNYSMLEYMML
RPIEAPIFDKTSAWLLADEKNYLTIVLDEAHMYRGSGGAEVAYLLRRLQSRLGISRDRIR
FILTSASLGSSTEAMAEIKDFAAKLTGGNAAGFELVTGDLITRSGGAPASSRVQKTFSEF
DYSSLLDTTTGLAQAHTNLMALASSLDITLDKPPLEKEGLQQFAFDLLNKLPVAALVAER
LTKYPSTLAACAEVAFPVPEGRDHAAEALLALMAFARDQETARPFCPIRSHLFFRGLPGL
YACTNVECGKSDSSGVPHSLGRLHPNETLRCECGARVYELLTHRSCGASYLRAFMQGADG
NFLWHQPSNGTWTENQLAEAQFYVVQESELDEVRGNVVWLHTPTGQLVSERPAGAAKGHY
LALLRPDTPTRDRGRTVMSFKGDCPACDQRTRPDAPLAMDLATKGEAPFAHIVRAQVATQ
PVTRIPTMQAPNGGRKTIVFSDGRQKAARLARDIPREIELDVFRQTLFMAAKALEEIGKE
ARLDDHIYTAFLKCLHEHNLRFFDGDDRRYLDDDLNKFVSFYDGDLELALGDRLTPPPSF
WAILLKQLGTPFYSISALTLGYVAPTKSARARILKESSNIPPEDLDAIIIAWIQRLLTRF
AFDRDMADGVREQASRYKLRPASAADGFSKLQREVLTMKGLNTDKLAECFAKNLCESKPD
GTVYLSPRYLVLRSALNEKWGQCEQCKTISPALIRGHCPNCMSPGAILVDPNNTSYLRAR
KGFWRDPVAKAASGTLSPMNIDVQEHSAQLSYKDADNPSPTTEIFERQFRDILRPDERAV
DVLSCTTTMEVGIDIGSLIAVSMRNVPPMRQNYQQRAGRAGRRGSAVSTVVTYAQSGAHD
AYYFRNPDKMLSGDPPRPVLDTSNQRIAVRHVFAQLMQDFFRPLAGNSKSSDIFTALGDT
WSFFTADAPTSFAAFKNWVWNSDEGRQSLDRSQLWLPNGLDSRKVAESMIAELETRAPKS
QEGLESSFIEFLFARGLLPSYAFPTDICSFQIQEHAPGAHGDFRVVEQAQQGLNIALSEY
APGRLVVLNKKTYRVGTVAASGPDTEVNRAAALFDQGKVYRHCTQCSYTAGFILGDDGSK
LCPQCGAESLRTMTVIRPEIVFPSKRREIDEFDDEQVFSQVSQAQLPLPDEERRIETESF
GENGGLAPRRQQRLVVVNEGDPDAAEVGFRVCTKCGKVLAESEREGPHYRDYYIRNFGTG
YPARCDGEFQRVFLGYAFTSDILLLRVALAKPLRFGIASRRNRKPLEDALQTLCEALTLS
IGRVLDIDPREVSAGYRFGNDGTSDFADIFIYDTLSGGAGYALQAGKFFGEIFEQAKQLM
TDCTCPTSCENCLRHYGNRFNHSSLDRHLGLDLAKYIELGEVPGELSAEQQLEVLKPLVE
LVQLTGWEVMNDDRGVQVMCRGMRFHLAACPSLRACDPKVQSNGLTVLTFTSYELTRDLP
SAFAELK
NT seq
5244 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaccgaccttggatgcaccctggagacttcgaagtgaacgcacagaattactcc
atcaaatccgtccacgagacgctgctcaagacgttccatcagtacctaagtgctcaatac
catatctgggacgagtggctcatcagcgagcgaaaccgcatcctcgaagaggttggcaac
acgtttcaggagccgaggctcgaagcaacaccgcattatgcatcgggtcacccatactca
gacctccaaatcccggatgaagctaaggcaatcttgacctttgcgtccaacgacgccagc
acgggcattccgaagatggcctactcgcaccagtgccgtgcaatcgagacttttgttaca
ggaaaagacctgatcgtcgctacgggtactggctccggcaagacggaaagtttcctgatg
ccgatcatgtcgagcctagccattgagtccacgcaaaggcctaagtcctgggcgatgccc
gcaatgcgcgccctcttgctgtaccccatgaatgcactggtaaacgaccagttgggtcgt
cttcggcggttattcggaaatcaaggtgtcagggaggccctgcgtggcaagaacaaacgg
gggccgacattcggcatgtacacaagtcggtccccctatcctggccttcgcaccaagaag
aaggacagggatcgtgtggtaggagagttgaccaaactctacatcgaaggaatgaccgac
aattatcgagaacgccttcagaaggagggcaaatggccttcaaaggatctggatggattc
ctgtcccgcgacctgaagactgacccttccgacactgagctcatcactcgccatgaaatg
caggacgcggcacctgacttgctggtgaccaactactcgatgcttgagtacatgatgctg
cggccgattgaagcacccattttcgacaaaacatcagcatggcttctcgcagacgaaaag
aactatttaacgatcgtcttggatgaggcacatatgtaccgcggctctggcggtgcggaa
gttgcctacttgcttcgtcgcctccagtcccggcttggcatctctcgcgacagaattcgg
ttcattctcaccagcgcaagccttgggtcatcgacagaggcaatggcagagatcaaagat
ttcgccgccaaactcactgggggtaatgccgccggattcgaactcgtgacaggcgacctg
atcactcgctcggggggagctcctgccagttcgagagtccagaaaaccttctctgaattt
gattactcttcattactggacacaacgacaggcctcgcccaagcgcacacgaacttaatg
gcacttgcgtcttccctagatataactcttgataagcctcctttggaaaaggagggcttg
cagcaattcgctttcgacttactcaataaactcccggttgcagctttggtagcggagcga
ctaacgaaatatccatctactttggcagcttgtgctgaagtcgcgtttccggttccagaa
ggccgtgatcacgctgccgaggcgcttctggcgctcatggcctttgcgagggatcaggaa
accgcacggccattctgccccatacgttctcatctcttctttcgtggcctgccagggcta
tacgcctgtacaaacgtggaatgcggaaagtctgatagttctggagttccccactcactc
ggccgtttacatcccaacgaaacattgcggtgcgaatgtggtgcacgcgtctatgaactt
ctgacccaccggtcgtgcggcgcatcctacctacgggccttcatgcaaggtgctgacgga
aatttcctttggcaccagccttcaaatggaacatggacggaaaatcaacttgccgaagcc
cagttctatgtggtccaagagtctgagcttgatgaagtccgtggcaacgtagtgtggctg
catactccaaccggacaactggtctcggaaagaccagcaggggcggcgaagggccactac
ctcgcgctcttacgtccggataccccgacacgagataggggcaggacggtcatgagcttc
aagggcgattgtccggcctgtgatcaacgcacccgtccggacgccccgctggcgatggat
ttggcgaccaagggcgaagcccctttcgctcacatcgtgcgggcgcaagtagcaactcaa
ccggtaacccgaatcccgacgatgcaggcaccgaatggtggtcgcaagaccattgtcttc
tcggatggccgccaaaaggccgctcgcctggcacgagacattcctcgagagattgaactt
gacgtctttcgccagacgcttttcatggccgccaaggctctcgaggagatcggaaaggag
gcgcgcctggacgatcacatatacacagcttttctgaaatgcttgcatgaacacaacttg
cggttcttcgatggcgacgatcgtaggtacctcgacgacgacttaaataaatttgtgagc
ttctatgatggcgacttggagttagcgttgggagaccggttgacgccacctccaagtttc
tgggccatcctgctgaagcaattgggaacgccgttctactcgatcagtgctttgactctg
ggatatgtagctccgactaagagtgcacgtgcgagaattttaaaggagagttctaatatc
cctcctgaagatctcgatgcaatcatcatcgcttggatccaacggctcctgactcgtttt
gcctttgacagggacatggccgatggtgtgagggagcaagcgtcgcgctacaaacttagg
cctgcaagtgcagcggatggcttctccaagctgcaaagggaggtcctcacaatgaaaggc
ttgaacaccgacaagcttgccgagtgttttgccaagaatctttgtgagtcgaagcctgat
gggaccgtttacctaagccctcggtacttggtactgagatctgcgctgaacgaaaaatgg
ggtcagtgcgagcaatgcaagacgatttcaccagcattgatacggggacactgcccgaat
tgcatgagccctggagccatcctagtcgaccccaacaacacaagctatctccgcgcacgc
aagggattctggcgggatccggttgccaaggccgcgtcaggcactttgtcgccgatgaat
atcgacgtccaggaacacagtgctcagttgtcctataaggatgcggataatccatccccc
accactgagattttcgagcgccagtttcgcgacattcttcgtcctgatgagcgcgcggtt
gatgtgttgagctgcaccacgacgatggaagtgggcattgacattggatcgctgatagca
gtgtccatgcgaaatgttccacctatgcgccaaaactaccagcagcgtgctggacgagca
ggtcgtcgcggctcggcagtttccacagtcgtcacctacgcccaatccggcgcccacgat
gcttattacttccgcaatccggataaaatgctctcgggagacccaccgagacccgtgcta
gatacatctaaccagcgcatcgcggtccgacatgtctttgcccagttgatgcaggacttc
tttcgcccgctggcagggaattctaagtcgtccgacatcttcaccgctttgggtgacacc
tggagcttcttcacggccgatgcaccgacaagcttcgctgctttcaagaattgggtatgg
aattcagatgaggggcgccaatcactggaccgctcacagttatggctgccgaacggactt
gattcacggaaggtcgcggagtcaatgatcgctgagttagaaacccgtgcccccaaatcg
caagaagggctggagtcaagctttatcgaatttttgtttgcccgaggcctccttccttcc
tacgcgtttccgaccgatatctgctcctttcaaattcaggagcacgcgcccggagctcat
ggcgacttccgtgtggttgagcaggcacaacaagggttgaacattgccctctctgagtat
gcccctgggcgattagtggtactgaacaagaaaacctatcgcgtaggcacagtcgcggca
tctggtccggacaccgaggtgaacagagctgctgcgctgtttgatcaagggaaggtttac
agacattgcacacaatgctcctacaccgcaggcttcatcctaggagatgatggatccaaa
ctttgcccacaatgcggtgcagaatcactgcgaaccatgacggtcatccgaccggagatt
gtctttccaagcaaacgccgcgaaatcgacgaatttgatgacgagcaggtcttcagccaa
gtctctcaggcgcagttgccattgccggatgaggagaggcgcatcgagacagagtctttc
ggagagaacgggggcctcgcgccaaggcggcaacaaaggctagttgtcgtcaacgaagga
gatcccgacgctgcggaagtcggctttagagtatgcactaaatgtggcaaggtgcttgca
gagagcgagagagaagggccgcactatcgagattattacatcaggaattttggaacaggc
tatccagcacggtgcgatggtgaattccagcgagtgttcctaggctatgcattcacctcg
gatatccttctactacgagtagcactagccaaaccgcttcgatttggtattgcttctcgt
cgaaacaggaagcctctcgaggacgcacttcagacgctttgtgaagcgttgactctttcg
attggccgcgtgctagatattgatcctcgtgaagtcagtgctggataccggttcggtaac
gatggtacttcggatttcgccgatatcttcatctatgacacgttgtccggtggtgccggt
tatgcgttgcaggcagggaaattctttggcgagatattcgagcaggcgaagcaactgatg
accgattgcacttgcccgacctcatgcgagaattgccttcgtcattatgggaatcgattc
aaccattcaagccttgatcgccacctcgggcttgaccttgcgaaatacattgagttgggc
gaagtacccggggaattgtccgccgaacagcagttggaagttctgaagccgcttgtcgaa
ctggtgcaactgacgggctgggaggtgatgaacgacgaccgaggggtccaagtcatgtgc
agaggaatgaggttccacctagctgcatgtccgtctttacgagcttgtgatcctaaagtg
cagtcgaatggcctaactgtattaacattcacttcctatgagttgactagagatttgcct
agtgcatttgcagagcttaaatga
DBGET
integrated database retrieval system
