Chromobacterium rhizoryzae: D1345_00635
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Entry
D1345_00635 CDS
T05688
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
crz
Chromobacterium rhizoryzae
Pathway
crz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
crz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D1345_00635 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crz03019
]
D1345_00635 (recQ)
03400 DNA repair and recombination proteins [BR:
crz03400
]
D1345_00635 (recQ)
Enzymes [BR:
crz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D1345_00635 (recQ)
Messenger RNA biogenesis [BR:
crz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
D1345_00635 (recQ)
DNA repair and recombination proteins [BR:
crz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
D1345_00635 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
SKI
T4SS-DNA_transf
Motif
Other DBs
NCBI-ProteinID:
AXT44802
UniProt:
A0AAD0W6Z0
LinkDB
All DBs
Position
159091..160896
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AA seq
601 aa
AA seq
DB search
MQDALSLLNNIFGYPEFRGQQGEIVDHVAQGGHALVLMPTGGGKSLCFQIPALMRPGVAI
VVSPLIALMQDQVATLVEQGVAAACLNSATPLDEARDIARQARAGSLDLLYVAPERLLTP
RFQEFVSQLNISLFAIDEAHCVSHWGHDFRPEYQQLGFLAERFPQVPRIALTATADEQTR
ADIIDYLKLQDARVFLSSFDRPNLFYQVVEKHNAKKQLLDFIRNEYPGSAGIVYCLSRKR
VEDTAQWLCDNGIHALPYHAGLSHQQRETNQREFLRDEGVVMVATVAFGMGIDKPDVRFV
AHIDMPKSPENFYQESGRAGRDGLPAASWLCYGLNDVVQLRQMIEGGEMAELQKQVELGK
LEAMLAFCEAASCRRQHILAHFGEQSRPCGHCDNCLHPPITFDATVAVQKLLSCIYRVEQ
RFSAGHVIDVLLGRANQSVGHYGHDKLSTFGIGRDYNQRVWRSIVRQLVARKLLHVDIAR
GQSLVLSDECRSVLKGQEKVYLRPVADDKASRSTAGADRWLRTEREERLWQALRGWRRQM
ADEHNVPAYAVFSDRTLRDLVEKHPTSRAGLAKVYGLGELKLARYGEALLELLNAAAAEA
G
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacgcgctctccctactcaataatatcttcggctatcccgaattccgcggacag
caaggggagattgtcgatcatgtcgcccagggcggccacgcgctggtgctgatgcccacc
ggcggcggcaaaagcctctgttttcagatccccgcgctgatgcgtccgggcgtcgccatc
gtggtgtcgccgctgatcgcgctgatgcaggaccaagtggccactctggtggaacagggc
gtggccgccgcctgtctcaattccgccaccccgctggacgaagcgcgcgacatcgcgcgc
caggcgcgcgccggctcgctggacctcttgtacgtggcgccggagcgcttgctgacgccg
cgtttccaagagttcgtatcgcagctgaacatcagcctgttcgccatcgacgaagcgcat
tgcgtcagtcactggggccatgacttccgtccggaataccagcaattgggtttcctcgcc
gaacgtttcccgcaagtgccgcgcatcgccctgaccgccaccgccgacgaacagacccgc
gccgacatcattgattacttgaagctgcaggacgcgcgcgtctttctatccagcttcgac
cggcccaatctgttctaccaagtggtggaaaagcacaacgccaagaagcagctgctcgac
ttcatccgcaacgaatacccgggaagcgccggcatcgtctactgcctgtcgcgcaagcgc
gtggaagacaccgcgcaatggttgtgcgacaacggcattcacgcgctgccttaccacgcc
ggcctcagccatcagcagcgtgagacgaatcagcgcgaattcctgcgcgacgaaggcgta
gtcatggtggccaccgttgccttcggcatgggcatagacaagccggacgtgcgcttcgtc
gcccatatcgacatgcccaagagtccggagaacttctatcaggaatccggccgcgctggc
cgcgacggcctgcccgccgccagttggctgtgctacggactcaacgacgtggtgcaactg
cggcaaatgatagagggcggggaaatggccgaactgcaaaagcaggtggaactaggcaag
ctcgaagccatgctggctttctgcgaagccgcgtcctgccgccgtcagcacatcctggcg
catttcggcgaacagagccgtccttgcggtcattgcgacaactgtctgcatccgcccatc
accttcgacgccaccgtggcggtgcaaaagctgctgtcctgcatttaccgggtggagcag
cgcttctccgccggccatgtgatcgacgtgctgctgggccgcgccaatcaaagcgttggc
cattacgggcacgataagctgtccaccttcggcatcggccgcgattacaaccaacgcgtc
tggcgctccatcgttcgccaactggtggcgcgcaagctgctgcatgtcgacatcgcccgc
ggccaatcgctggtgttgagcgatgaatgccgcagcgtgctcaaaggccaggaaaaagtc
tatctgcggccggtggccgacgacaaagcgtcgcgcagcacagccggcgccgaccgctgg
ctgcgcaccgaacgcgaagaacggctgtggcaggcgctgcgcggctggcgccgacaaatg
gcggacgagcacaatgtgccggcctacgcggtgttctccgaccgcaccttgcgagacctg
gtggaaaagcatccgacctcgcgtgccggcctggccaaggtctatgggttgggggaactc
aagctggcgcgctacggtgaggcgctgctcgaattattgaacgcggcggcggccgaggcg
ggctga
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