Chromobacterium rhizoryzae: D1345_03620
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Entry
D1345_03620 CDS
T05688
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
crz
Chromobacterium rhizoryzae
Brite
KEGG Orthology (KO) [BR:
crz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crz03021
]
D1345_03620 (rpoS)
Transcription machinery [BR:
crz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
D1345_03620 (rpoS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
AXT45331
UniProt:
A0AAD0RQR5
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All DBs
Position
complement(828504..829451)
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AA seq
315 aa
AA seq
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MSSELDILEEQEILDEESNEEAVAEVEAEEVGEAQPVYEEVADVTQIYLNDIGNNALLTP
QEELALARRVVAGEFEARQKMIEHNLRLVVNIAKHYINRGLALLDLIEEGNIGLMHALEK
FDPERGFRFSTYATWWIRQSIERAIMNQSRTIRLPVHVIKELNVYLRASRHLESQIGREP
TLDEIAHLVGKPVDDVRKVMNLNERMASLDAPLDIDPMLSIGESIPDEQHDEPEIQLHNS
QLEHFVHEWLGQLNEKQKLVIERRYGLNGYEICTLEELAAALSLTRERVRQIQIEGLEQL
RRILRRKGISKDFLL
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcgaactcgacattctcgaagagcaagaaattctcgacgaggaaagcaatgag
gaagctgttgctgaagtggaggcagaggaagtcggcgaagcgcagccggtatacgaagaa
gttgccgacgtcacccaaatctacctcaacgatatcggcaacaacgctctgttgacgccg
caggaagaactggctctggcccgccgcgtggtggccggcgagttcgaagcgcggcaaaag
atgatcgaacacaatctgcggctggtggtgaacatcgccaagcattacatcaaccgcggc
ctggcgctgctggatctgatcgaggaaggcaatatcggtctgatgcacgcgctggagaag
ttcgatccggagcgcggcttccgcttctccacctatgccacctggtggattcgccagagc
atagaacgcgccatcatgaatcaatctcgcaccatccgcctgccggtgcatgtgatcaag
gagctcaacgtttatctacgcgcctcgcgccatctggaaagccagatcggccgcgagccg
acgctggatgaaatcgcccatctggtgggcaagccggtggacgatgtgcgcaaggtgatg
aacctcaacgagcgcatggcctcgctggacgcgccgctggatatcgacccgatgctgtcg
atcggcgagtccattccggacgagcagcatgacgagccggaaatccagttgcacaacagc
cagttggaacacttcgtccatgaatggctgggccaactgaacgagaagcaaaaactggtg
atcgagcgccgctacggcctcaacggctacgagatctgcacgctggaagagttggccgcc
gcactgagcctgacccgcgaacgcgtgcgccagatccagattgaaggcctggaacaacta
cgccgcatcctgcgccgcaagggcatctccaaggactttctgttgtag
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