Chromobacterium rhizoryzae: D1345_05575
Help
Entry
D1345_05575 CDS
T05688
Name
(GenBank) LysR family transcriptional regulator
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
crz
Chromobacterium rhizoryzae
Brite
KEGG Orthology (KO) [BR:
crz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crz03000
]
D1345_05575
Transcription factors [BR:
crz03000
]
Prokaryotic type
Helix-turn-helix
LysR family
D1345_05575
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
HTH_Tnp_ISL3
HTH_23
P22_Cro
MarR_2
HTH_11
HTH_24
YdaS_toxin
HTH_8
Motif
Other DBs
NCBI-ProteinID:
AXT45679
UniProt:
A0AAD0RQ46
LinkDB
All DBs
Position
complement(1225335..1226225)
Genome browser
AA seq
296 aa
AA seq
DB search
MSERINFKHLHYFWAVAHAGGVTRAAEQLGVSAQTVSGQISRLEQSLERTLFRQQGRQLV
LTEAGHVTLRYADQIFMLGEELQETLEDAQLDKTIRLAAGISDVLPKAIALKLLEPALRL
DAKVRLQCGEGDFDELLADLTRHRLDVVLADRPMAAGGSQPFQSWLLMRCPVKIAGAAEL
WRRHAAGFPASLNQAPMLLPSRHHVLRSQLDQWFEERRIKPDIVAEFDDGALLDAFGRQG
FGLFPTTAPSDGNANAPQALGEVDGVWEHYYAIANRRRLRHPGVQAMLQAAIEAAS
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaacggatcaacttcaagcatctgcattacttctgggcggttgcccacgccggc
ggcgtcacccgagcggcggaacaattgggcgtcagcgcccaaaccgtcagcggccagatt
tcgcgtcttgagcagagcctggagcgaaccttgttccgacaacaggggcgccagctggtt
ctgaccgaagccggccatgtaacgctgcgctacgccgaccagatcttcatgctgggcgag
gaattgcaggaaacgctggaagacgcgcagctggacaagaccatccgcctggcggcgggc
atctcggacgtgttgcccaaggccattgcgctcaagctgttggaaccggcgctgcggctg
gacgccaaggtcaggctgcaatgcggcgaaggcgatttcgacgaattgctggccgacttg
acccgccaccggctggacgtggtattggcggaccggccaatggcggctggcggatcgcag
ccctttcaatcctggctgctgatgcgctgcccggtaaagatcgccggcgcggcggaatta
tggcgacgccacgccgcgggattccccgccagcctgaaccaagcgccaatgttgctgccc
agccgccaccatgtgctgcgcagccagctggaccaatggtttgaagaacgcaggatcaag
ccggacatcgtggcggagttcgacgacggcgccttgctggacgccttcggccgccagggc
ttcggtctgtttcccaccacggcgccaagcgacggcaacgcgaacgcgccgcaggcgctg
ggcgaggtcgacggcgtctgggaacattattacgccatcgccaaccgtcgccggctgcgg
catccgggtgtgcaggccatgctgcaagccgccatagaagccgcgtcctga
DBGET
integrated database retrieval system
