Chromobacterium rhizoryzae: D1345_06105
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Entry
D1345_06105 CDS
T05688
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
crz
Chromobacterium rhizoryzae
Pathway
crz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
crz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D1345_06105 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crz03019
]
D1345_06105 (pnp)
03016 Transfer RNA biogenesis [BR:
crz03016
]
D1345_06105 (pnp)
Enzymes [BR:
crz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
D1345_06105 (pnp)
Messenger RNA biogenesis [BR:
crz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
D1345_06105 (pnp)
Transfer RNA biogenesis [BR:
crz03016
]
Prokaryotic type
tRNA degradation factors
D1345_06105 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
OB_RRP5_4th
KH-I_KHDC4-BBP
S1_RRP5
KH_2
KH_KhpA-B
RTX_C
Motif
Other DBs
NCBI-ProteinID:
AXT45776
UniProt:
A0AAD0W7Y4
LinkDB
All DBs
Position
1350370..1352514
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AA seq
714 aa
AA seq
DB search
MFNKITKSFQYGRHTVTLETGEVARQASGSVIVTVEDTVVLVSVVGGKNVKPGQDFFPLT
VDYLERTYAAGKIPGGFFKREGKQSEKEVLTSRLIDRPIRPLFPEGFFHDVQIVATVMSL
NPEVDSDIPAMIGASAALAISGLPFAGPIGAARVGYANGEYILNPTRTELAASEMDLVVA
GTERAVLMVESEAKELPEAVMLGAVVFGHEQMQAAIKAINELADEVNPVMFDWAAPVANE
ELIAQVRAIAGEQLANAFRLRQKQARTVAINEAWDAVKSSLITENTDTLKANEIKGIFKG
LEAEIVRGQILAGEARIDGRDTRTVRPISIRNNVLPRTHGSALFTRGETQAMVVTTLGTK
QDEQIIDALAGEYTERFMLHYNFPPYSTGEAGRMGPPKRREIGHGRLAKRALVAVLPPES
EFGYSMRVVSEITESNGSSSMASVCGGCLSLLSAGVPLKAHVAGIAMGLILEGNRFAVLT
DILGDEDHLGDMDFKVAGTAAGVTALQMDIKIQGITKEIMQVALDQAKEGRMHILGLMKE
AVDGPQELSAHAPRLYVMKINPDKIREVIGKGGETIRSITKDTGCEINIEEDGTITIASI
SNEGAEAAKKRIEEITVEVEVGKVYEGTVVKILDNNVGAIVSILPGKDGLVHISQIANER
IKNVADYLKEGQVVKVKAIEMDDRGRIRLSIKALLEEEAKTAQATADSFGLKTQ
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
gtgttcaataaaatcactaagtctttccagtacggccgtcataccgtgactctggaaacc
ggcgaagtcgcacgccaggcgtccggctccgtcatcgtcaccgttgaagacaccgtggtg
ctggtctccgtggttggcggcaagaacgtcaagccgggccaggacttcttcccgctgacc
gtggactacctcgagcgcacctacgccgcaggcaagatcccgggcggcttcttcaagcgc
gaaggcaagcagtccgagaaggaagtgctgaccagccgcctgatcgatcgtccgatccgc
ccgctgttcccggaaggcttcttccacgacgtgcaaatcgtcgccaccgtgatgtcgctg
aacccggaagtggattccgacatcccggcgatgatcggcgcttccgccgctctggccatt
tccggcctgccgttcgccggcccgatcggcgccgcgcgcgttggctacgccaatggcgaa
tacatcctgaacccgacccgcaccgagttggccgcctccgaaatggacctggtggttgcc
ggtaccgagcgcgcggtgctgatggtggaatccgaagccaaagaactgccggaagccgtg
atgctgggcgccgtggtgtttggccacgagcaaatgcaagccgcgatcaaggccatcaac
gaactggccgacgaagtgaacccggtgatgttcgactgggccgctccggtcgccaatgaa
gagctgatcgcccaagtgcgcgccatcgccggcgagcaactggccaacgctttccgcctg
cgccagaagcaagcccgcaccgtggcgatcaacgaagcctgggacgcggttaagtcaagc
ctgatcaccgaaaacaccgataccctgaaggccaatgagatcaagggcatcttcaagggt
ctggaagctgagatcgttcgcggtcagatcctggccggcgaagcccgcatcgacggtcgc
gacacccgcaccgtgcgcccgatcagcatccgcaacaacgtgctgccgcgcacccacggt
tccgcgctgttcactcgcggcgaaacccaagccatggtggtgaccaccctgggcaccaag
caggacgagcagatcatcgacgcgctggccggcgagtacaccgagcgcttcatgctgcac
tacaacttcccgccgtactccaccggcgaagccggccgcatgggcccgccgaagcgccgt
gaaatcggccatggccgcctggccaagcgcgcgctggtagccgtgctgccgccggaatcc
gagttcggttactcgatgcgcgtggtgtcggaaatcaccgaatccaacggctcctcgtcg
atggcttccgtgtgcggcggctgcctgtcgctgctgtccgccggcgtgccgctgaaggcg
cacgtggctggtatcgccatgggtctgatcttggaaggcaatcgcttcgcggtgctgacc
gacatcctgggcgatgaagatcacctgggcgacatggacttcaaagtcgccggtaccgcc
gcaggcgtgaccgcgctgcagatggacatcaagatccagggcatcaccaaggaaatcatg
caggtggcgctggatcaggccaaggaaggccgcatgcacatcctgggtctgatgaaggaa
gccgtggacggcccgcaagagctgtccgctcacgctccgcgtctgtacgtgatgaagatc
aacccggacaagatccgggaagtgatcggcaagggcggcgaaaccatccgctccatcacc
aaggacaccggctgcgagatcaacatcgaggaagacggcaccatcaccatcgcttcgatc
agcaacgaaggcgcggaagccgccaagaagcgcatcgaagagatcactgttgaagtggaa
gtgggcaaggtgtacgaaggcaccgtggtcaagatcctcgacaacaatgtaggcgccatc
gtgtctatcctgccgggcaaggatggtctggttcacatttcccagatcgccaacgagcgc
atcaagaatgtggccgactatctgaaagaaggccaggtagtgaaggtcaaggccatcgaa
atggacgaccgcggccgcatccgcctgtccatcaaggccttgctggaagaagaagccaag
accgcgcaggcaactgccgactccttcggcctgaaaacccagtaa
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