Chromobacterium rhizoryzae: D1345_09905
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Entry
D1345_09905 CDS
T05688
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
crz
Chromobacterium rhizoryzae
Pathway
crz03410
Base excision repair
crz03430
Mismatch repair
crz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
crz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
D1345_09905 (recJ)
03430 Mismatch repair
D1345_09905 (recJ)
03440 Homologous recombination
D1345_09905 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
crz03400
]
D1345_09905 (recJ)
DNA repair and recombination proteins [BR:
crz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
D1345_09905 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
D1345_09905 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
D1345_09905 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
AXT46484
UniProt:
A0AAD0RR50
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All DBs
Position
2182975..2184690
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AA seq
571 aa
AA seq
DB search
MSQIVSRSIPADTHEQLLRQGLSPLMARLYAARGICDCAELDYGLKALLPYQNLKNIQPM
AERLADAIAGRQRLLVVADYDADGATACAVAVKGLSMLGARVDFIVPNRFEYGYGLTPEI
VELAARQNPDIIVTVDNGIASVDGVLAAKALGIEVLVTDHHLPGDVLPEALIVNPNQPGC
EFPSKNLAGVGVMFYVLLALRAEMRRRGVFDERSQPNLGELLDYVALGTVADVVRLDQNN
RTLVENGLKRMRAGRMAPGIAALFRVAGRAHYKANTFDLGFTLGPRLNAAGRLDDMSLGI
ACLLAANEEQAMRLAQQLDQLNRERRSIEHGMQDEALAALSGIDADNRYTLTLFRDDWHQ
GVVGIVASRLKERFHRPAIVFAPGDNGEIKGSGRSIPGFHLRDALDLVFKRHPGLILKFG
GHAMAAGLSLKQTRFDEFQRAFEAVARELLEERHLTRTIETDGSLAPRELNLAFAEQLAA
EVWGQGFPVPYFHDRFAVMSQRVVGDKHLKLRLARDGEEFDAMLFNQVEWLPDNVDAVYQ
LIANEWQGRKELQVYLQHWAAVGLEREGLGV
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaaatcgtttcccgaagcattcccgccgatactcatgaacaattgctgcgtcag
ggcttgagcccgttgatggcgagactgtacgccgcgcgcggcatttgcgactgcgccgag
ctggattacggcctcaaggcactgctgccctatcaaaacctgaaaaacatccagccgatg
gcggagcgcctggccgacgccatcgccggccgtcaacgcctgttggtggtggcggattac
gacgccgacggcgccaccgcctgcgcggtggcggtcaagggcttgtccatgctgggcgcg
cgcgttgacttcatcgtgccaaatcgcttcgagtacggttacggcctgacgccggagatc
gttgaactggccgcgcgtcaaaaccccgacatcattgtcaccgtggacaacggcatcgcc
agcgtggacggcgtgctcgccgccaaggcgctcggcattgaagtgctggtcaccgatcac
cacctgcccggcgacgtgttgccggaggccttgatcgtcaaccccaatcagcccggctgc
gaatttccgtccaagaacctggccggcgtgggggtgatgttctacgtgctgctggcgctg
cgcgccgaaatgcgccggcgcggagtgtttgacgagcgtagccagcccaatctgggagag
ctgctggactatgtggcgctgggcacggtggccgacgtggtgcggctggatcagaacaat
cgcaccttggtggaaaacggcctcaagcgcatgcgcgccggccgcatggcgccaggcatc
gccgctttgttccgcgtcgccggccgcgcgcattacaaggccaacacttttgacctgggg
ttcacgctgggcccccgtttgaacgccgccggccggctggacgatatgagcctgggcatc
gcctgcctgctggccgccaatgaggaacaggcgatgcggctggcgcaacagctggaccag
ctcaaccgcgaacggcgcagcatagagcacggcatgcaggacgaggcgctggcggcgttg
tccggcatcgatgccgacaaccgctacacgctgactctgttccgcgacgactggcatcag
ggcgtggtcggcatcgtcgcctcccggctcaaggagcgcttccatcggccggccatcgtg
ttcgcgcccggcgacaacggcgagatcaagggctccggccgctcgattcccggcttccat
ctgcgcgacgcgctggacttggtgttcaagcggcatcccggcctgattctcaagttcggc
ggccatgcgatggcggccggccttagcctgaaacagacgcgctttgacgagtttcagcgc
gccttcgaggcagtggcgcgcgagttgttggaagagcgccatctgacccgcaccatagaa
accgacggcagcctggcgccgcgcgaattgaacctggccttcgccgagcaattggcggcc
gaggtgtggggccagggcttccccgtaccttacttccacgaccgtttcgcggtgatgagc
cagcgcgtggttggcgacaagcacttgaagctgcgcttggcgcgcgacggagaggagttc
gacgccatgttgttcaatcaggtggaatggctgccggacaatgtcgacgcggtgtatcag
ttgatcgccaatgaatggcagggccgcaaggagttgcaagtgtatttgcagcattgggcg
gcggtgggtttggagagggaggggctgggtgtttag
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