Chromobacterium rhizoryzae: D1345_10010
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Entry
D1345_10010 CDS
T05688
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
crz
Chromobacterium rhizoryzae
Brite
KEGG Orthology (KO) [BR:
crz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
crz03400
]
D1345_10010 (sbcD)
DNA repair and recombination proteins [BR:
crz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
D1345_10010 (sbcD)
Archaeal homologous recombinant proteins
D1345_10010 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AXT46504
UniProt:
A0AAD0RRQ6
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All DBs
Position
2204813..2206033
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AA seq
406 aa
AA seq
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MRILHTSDWHLGQHFIGKTRLAEHQAFIHWLLEQAESHQADAVLVAGDIFDTGAPPSYAR
ELYNGLIAQAHRAGVQLVLLGGNHDSVATLAESRALLSYLSACVVPALSEDPAEQVLILK
RRDGEPGALLCALPYIRPRDVLRSQAGQSAEQKQQSLQDAIRERYQQVYEQALRLRERLG
RPLPIIASGHLTTVGASASESVREIYVGALEAFPSNAFPPADYIALGHIHRPQKVGGHEH
IRYSGSPIPLSFDEAGQGKEVLLVELDAQGLCGVTPLEVPCFQPLRSVRGSLAQLPALLA
EAAEAGSAERPVWLEVVVSADDYLSDLAARAQAMCAELPLELLRVRRERGQSASGLASTA
GETLAELTPLDVFERRLALETLEPPLQEQLRLRYREILASLQEEQA
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcctccacacctcggactggcacctgggccagcatttcatcggcaaaacccgc
ctggcggagcatcaggccttcattcattggctgctggagcaggcggaaagccaccaggcc
gacgccgtgctggtggccggagacattttcgacaccggcgcgccgcccagctacgcgcgc
gaactgtacaacggcctgatcgcccaggctcaccgtgccggcgtgcaactggtgctgttg
ggcggcaaccacgactccgtggccacgctggcggaaagccgcgcgctgctgtcctatctg
tccgcttgcgtggtgccggccctgagcgaagaccctgcagaacaagtgttgatcctcaaa
cgccgagacggcgaaccgggcgcgttgctgtgcgcgctgccctatatccgcccgcgcgac
gtgttgcgcagccaggcgggccagagcgcggagcaaaagcagcaatccttgcaggacgcc
atccgagaacgctaccagcaggtgtacgagcaggcgctccgcctgcgcgagcggctgggc
cggccgctacccattattgccagcggccatctgaccacggtgggcgccagcgccagcgaa
tccgttcgcgagatctacgttggcgcgctggaggccttccccagcaacgccttcccgccg
gccgactacatcgccctcggccatatccaccggccgcagaaagtgggcggccacgaacac
attcgttacagcggctcccccatcccgctgagtttcgacgaagccggccagggcaaggag
gtgctcttggtggagctggacgcccagggcttgtgcggcgtcacgccgctggaggtgcct
tgcttccaacccttgcgctcggtgcgcggcagcctggcccagctgccggcgctgttggcc
gaggcggctgaagccggctccgccgaacggccggtgtggctggaagtcgtggtcagcgcc
gacgactacctgagcgatctggccgcccgcgcgcaggcgatgtgcgcggaactgccgctg
gagctgttgcgcgtgcggcgcgagcgcgggcagtccgcctcagggctagcctcgaccgcc
ggcgaaaccctggcagagctgacgccgctggacgtgttcgagcgccggctggcgctggaa
acgctggagccgccgttacaggagcaattgcgcttgcgctaccgcgaaatcctggcctcg
ctgcaggaggaacaggcatga
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