Chromobacterium rhizoryzae: D1345_10235
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Entry
D1345_10235 CDS
T05688
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
crz
Chromobacterium rhizoryzae
Brite
KEGG Orthology (KO) [BR:
crz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crz03000
]
D1345_10235
Transcription factors [BR:
crz03000
]
Prokaryotic type
Helix-turn-helix
Other families
D1345_10235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
AAA_lid_14
AAA_5
AAA_2
Mg_chelatase
HTH_30
AAA
HTH_23
HTH_29
HTH_28
GAF_2
AAA_16
nSTAND3
MCM
HTH_1
IclR_C
HTH_psq
AAA_3
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
AXT46543
UniProt:
A0AAD0RXG8
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All DBs
Position
2272466..2274277
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AA seq
603 aa
AA seq
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MDHPIALPVERARRSFFQQGLAPAGLRGEIAQSWQRCRQQALPPQAARQEDGLEGAALNA
LREANGLLLRLAQPELDGLGEQVIDRRGIVLLSDADGVILNAAGCPGFLPKAEQVALLPG
MAWGERDRGTNAIGTALALGAAVQVNGGEHYLASNGGISCSAAPIFAPNGRLAGALNISS
DARAHDAHALGLVRLAARQIEHRWLARSASEHWLVRFHLNHALLGSPREGVLVFADEVLV
EANSCALAWLGLVWADLGRVRFGQLFDGELEPADGLRTRLSRRGQHFHLRITPPARKALA
ECQTPKTEAAARPSAELQRAVKVLNADIPVLLLGETGVGKEVFARALHAASRRGRGPFVA
VNCAAIPEALIESELFGYEEGAFTGARRKGMAGKLREASGGVLFLDEVGDMPAAMQARLL
RALQQREVTPLGGGQTHAVDFALICATHSDLAAMTASGEFRADLFYRLQDYPVRLPPLRE
RDDLPRLIDEMWDELGAEQRGVRLGGPLRAALQACSWPGNARQLYSALRTMLALADDGVV
LGEEDLPSGCRVDAPRACPTLTVGRDELIERALARCQGNVSRAAAELGVARSTVYRRRKQ
TPR
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggatcatcccatcgctttgcccgtggaacgggcacgccgcagcttctttcagcaagga
ctggcgccggcggggctcaggggcgaaatcgcccagtcttggcagcgttgccgacaacaa
gccttgccgccgcaggccgcgcggcaagaggacggcctggagggcgcggcgctgaacgcg
ctgcgcgaggccaacgggctgctgctgcggctggctcagcccgagctggacgggctgggg
gagcaagtcatcgaccgccgcggcatcgtgctgctcagcgatgccgacggcgtgattctc
aacgccgccggctgccccggctttttgcccaaggcggaacaggtggccttgttgcccggc
atggcctggggcgagcgggaccgaggcaccaacgccatcggcaccgctctggccttgggc
gcggcggtgcaggtgaacggcggggaacactatctggccagcaatggtgggatttcctgc
tcggccgcgcccattttcgcgcccaacggccgcctggccggcgcgctgaacatcagcagc
gacgcgcgcgcccatgacgcgcacgcgctgggcctggtgaggctggccgcgcgccagatt
gaacaccgctggctggcccgatcggcctccgagcattggctggtgcgcttccatttgaac
cacgctttgctggggtcgccgcgcgaaggcgtgctggttttcgccgatgaggtgctggtg
gaagccaacagctgcgcgctggcctggctgggcctggtttgggcggacctgggccgggtg
cgcttcggccagctgttcgacggcgagctggaaccggccgacggcttgcggacgcggctt
agccggcgcggccagcattttcatctgcgtatcacgcctccggcgcgcaaggccttggcc
gaatgtcaaacgcccaagaccgaggcggcggcgcggccctctgccgagttgcagcgcgcc
gtcaaagtgctgaacgccgacatcccggtattgctgctgggcgaaaccggtgtgggcaag
gaggtgttcgctcgcgctttgcacgccgccagccggcgcggccgcggccccttcgtcgcc
gtcaactgcgcggcgatccccgaggcgctgatcgaatcggagctgtttggctacgaggag
ggcgccttcaccggcgcgaggcgcaagggcatggcgggcaagctgcgcgaagccagcggc
ggcgtgttgttcctggatgaggtgggggatatgccggcggcgatgcaggcgcgcttgctg
cgcgccttgcagcagcgcgaagtcacgcccttggggggaggtcaaacgcatgcggtggac
ttcgcgctgatttgcgccacccatagcgacctggcggcgatgacggcgtccggcgagttc
cgcgccgatctgttctaccgcttgcaggactacccggtacggctgccgcccttgcgcgag
cgcgacgacctgccgcgcctgatcgacgagatgtgggacgaactgggcgcggaacaacgc
ggcgtgcgcttgggcgggccgctgcgcgcggctttgcaggcctgcagctggccgggaaac
gcgcgccagctgtacagcgccttgcgcaccatgctggccctggccgacgatggggtggtg
ctgggggaagaggacctgccgtccggctgccgggtcgatgccccccgagcttgccctacg
ttgacggtgggccgcgacgagttgatcgagcgggcgctggcgcgttgccagggcaatgtc
agccgcgcggcggcggagctgggtgtggcgcgcagcacagtgtaccgtcggcgcaagcag
acgccgagatag
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