Chromobacterium rhizoryzae: D1345_13240
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Entry
D1345_13240 CDS
T05688
Name
(GenBank) type I secretion system permease/ATPase
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
crz
Chromobacterium rhizoryzae
Pathway
crz02010
ABC transporters
crz03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
crz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
D1345_13240
03070 Bacterial secretion system
D1345_13240
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
crz02000
]
D1345_13240
02044 Secretion system [BR:
crz02044
]
D1345_13240
Transporters [BR:
crz02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
D1345_13240
Secretion system [BR:
crz02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
D1345_13240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
AAA_16
AAA_22
AAA_29
AAA_21
SbcC_Walker_B
AAA_18
NB-ARC
PRK
DUF87
Motif
Other DBs
NCBI-ProteinID:
AXT47105
UniProt:
A0AAD0RR82
LinkDB
All DBs
Position
complement(2920121..2922268)
Genome browser
AA seq
715 aa
AA seq
DB search
MLAQTDTDGSASSANISDLGLLGLVLLAQFHGVAADPAQLTHQYGRQAEPFSETDLLLAA
KGLDLKARIVKQSPDRLSLTALPALALRPDGEHFIIARCDGDKVLIHDLKHGRPQVLSQA
ELTARYAGRLLLMASRASAAGALAKFDFTWFVPAIVKYRKLLLEVLAVSLVLQLFALVTP
LFFQVVMDKVLVNRAFNTLDVIAVGLLILSLFNVALSALRSHVFAHTTSRIDVELGARLF
RHLLALPLAYYEARRVGDTVARVRELDNIRNFLTGQALTTVLDLLFSFVFLAVMWYYSGW
LTLIVLVSLPCYALWSAGLTPLLRRRLDEKFARGADNQSFLVEAVGGIGTIKAMAVEPHM
TRRWDNQLAAYVAAGFRVTRLANIGQNGVQLIQKLVTVATLWLGARLVIAGELSVGQLIA
FNMLAGQVAAPVVRLAQLWQDFQQIGISVERLGDILNTRSELPASRAALPAIQGRIQFDQ
VVFRYRPDGPEILRGLSLDIRAGEVIGIVGRSGSGKSTLTKLVQRLYVPESGRVLVDGND
LALADPAWLRRQIGVVLQENLLFNQSIRDNIALAEPGLALDHVIHAAKLAGAHDFIMEQA
EGYDTIVGEHGASLSGGQRQRIAIARALISNPRILILDEATSALDYESERAIMQNMRAIC
QGRTVLIIAHRLSTVRGASRIIAMDQGRIVESGRHEDLLRQPDGYYARLHSLQQG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgcttgctcaaacggatacggacggttctgcctcctccgcaaacatcagcgatttgggc
ttgctcggcctggtcttgctggcccagttccacggcgtggccgccgacccggcgcaactc
acccaccaatacggccgccaggccgaacccttcagcgaaaccgacctgctgctggccgcc
aaaggcctggaccttaaggcccgcatcgtcaaacaaagcccagatcgcttgagtctgacc
gccttgccggcgctggcgctgcggccggacggcgaacacttcatcatcgcccgctgcgac
ggcgacaaagtgctgatccacgacctcaagcacggccggccgcaagtgctgagccaggcg
gagctgacggcgcgctacgccggccggctgctgctgatggcttcgcgcgcgtcggcggcg
ggggccttggccaagtttgacttcacctggttcgtgccggccatcgtcaaataccgcaag
ctcttgctggaagtgctggcggtgtcgctggtgttgcagctgttcgcgctggtgacgccg
ctgttcttccaggtggtgatggacaaggtgctggtcaaccgcgccttcaacaccctggac
gtgatcgcggtggggctgttgatcctgtcgctgttcaatgtggcgttgtcggcgctgcgc
agccacgtgttcgcccacaccaccagccgcatcgacgtggaactgggcgcgcggctgttc
cgccacctgctggcgctgccgctggcctactacgaagcgcggcgggtgggggacaccgtg
gcgcgggtgcgcgagctggacaacatccgcaacttcctgaccggtcaggcgctgaccacg
gtgctggacctgctgttctccttcgtattcctggcggtgatgtggtactacagcggctgg
ctgaccctgatcgtgctggtgtcgctgccgtgctacgcgctatggtcggcggggctgacc
ccgctgctgcggcgacggctggacgagaagttcgcgcgcggcgccgacaaccaatccttc
ctggtggaagcggtgggcggcatcggcaccatcaaggcgatggcggtggaaccgcacatg
acccggcgctgggacaaccaactggccgcctacgtggccgccggcttccgcgtcacccgg
ctggccaatatcggccagaacggcgtgcaactgatccagaaactggtcactgtcgccacc
ctgtggctgggcgcgcggctggtgatcgccggcgagctgtccgtcggccaactgatcgcc
ttcaatatgctggccggccaagtggccgcgccggtggtgcggctggcgcagctgtggcag
gacttccagcagattggcatctcggtggaacggctgggcgacatcctgaatacccgcagc
gaactaccggccagccgcgcggcgctgccggcgatccagggccgtatccaatttgaccaa
gtggtgttccgctaccgtccggacggcccggaaatcctgcgcggcctgagcctggacatc
cgggccggcgaagtcatcggcatcgtcgggcgctccggctccggcaaaagcacgctgacc
aaactggtgcaaaggctgtacgtgcccgaatccgggcgcgtgctggtggacggcaatgac
ctggcgctggcggacccggcctggctgcggcggcagatcggcgtggtgctgcaagagaac
ctgctgttcaaccaaagcatccgcgacaacatcgcgctggccgaacccgggctggcgctg
gaccacgtgatccacgccgccaaactggccggcgcccacgacttcatcatggaacaggcc
gaaggctacgacacgattgtgggcgaacacggcgccagcctgtccggcggccagcgccag
cgcatcgccatcgcccgcgcgctgatcagcaacccgcgcatcctgatcctggacgaagcc
accagcgcgctggactacgaatccgaacgcgcgatcatgcaaaacatgcgcgccatctgc
cagggccgcaccgtgctcatcatcgcccaccgcctcagcaccgtgcgcggcgccagccgc
atcatcgccatggaccaaggccgcatcgtcgaaagcggccgccacgaagacctgcttcgc
cagcccgacggctactacgcccgcctgcacagcctgcaacaaggataa
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