Chromobacterium rhizoryzae: D1345_14185
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Entry
D1345_14185 CDS
T05688
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
crz
Chromobacterium rhizoryzae
Pathway
crz00541
Biosynthesis of various nucleotide sugars
crz01100
Metabolic pathways
crz01250
Biosynthesis of nucleotide sugars
Module
crz_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
crz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
D1345_14185 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
crz01005
]
D1345_14185 (rfaD)
Enzymes [BR:
crz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
D1345_14185 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
crz01005
]
Core region
D1345_14185 (rfaD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
DapB_N
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
AXT47268
UniProt:
A0AAD0RSY0
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Position
complement(3138770..3139765)
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AA seq
331 aa
AA seq
DB search
MTIVVTGAAGFIGSNLVKALNERGVTDIIAVDNLSSGDKFRNLVDCEIAHYMDKHDFLAL
LLEGEFEGELSAILHQGACSDTMNHDGKYMMDNNYQYTLALFDYCQHEEIQFLYASSAAT
YGKGTVFKEERQYEGPLNVYGYSKFLFDQVLRQRMKEGLSAQAVGFRYFNVYGPREQHKG
RMASVAFHHFNQYREHGKVKLFGGWDGWGNGMQSRDFVSVEDVAKINLYFLDHPEKSGIF
NLGSGRSQPFNDVAVATVNACRRHEGQPGLSLDEMVAQGIVEYVDFPDALKGKYQSFTQA
DIGKLRSAGYDAELFSVEQGVDRYVDWLIKQ
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgactatcgtcgttaccggcgccgccggttttatcggttccaacctggtcaaagcgctg
aacgagcgcggcgttaccgacatcatcgccgtggataatctgtccagcggcgacaaattc
cgtaatctggtggattgcgaaatcgcccattacatggacaagcacgacttcctggcccta
ttgctggaaggcgagttcgagggcgagttgtccgccatcctgcaccagggcgcgtgttcc
gacaccatgaaccacgacggcaagtacatgatggacaacaactatcagtacacgctggcc
ctgttcgactactgtcagcacgaggaaatccagttcctctacgcttccagcgcggccacc
tacggcaagggcaccgtgttcaaggaagagcgccagtacgaaggcccgctcaatgtctac
ggctactccaaattcctgttcgaccaagtgctgcgccaacgcatgaaggaaggtctgagc
gcgcaggcggtgggcttccgctatttcaacgtctacggtccgcgcgagcagcacaagggc
cgcatggcctcggtggccttccaccatttcaaccagtaccgcgagcatggcaaggtcaag
ctgttcggcggctgggacggttggggcaacggcatgcaaagccgcgatttcgtgtcggtg
gaggacgtggccaagatcaacctatatttcctggatcacccggaaaagagcggcatcttc
aacctgggttccggccgttcgcagccgttcaacgacgttgcggtggccaccgtcaacgcc
tgccgccgccatgagggccagccggggctgagcctggacgagatggtggctcagggtatt
gtcgaatacgtcgatttccctgatgcgctcaagggcaagtaccagagctttacacaagcg
gatattggcaagctgcgcagcgccggctacgacgccgaattgtttagcgtcgagcagggt
gtggaccgttacgtggattggctgatcaagcaatga
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