Chromobacterium rhizoryzae: D1345_15170
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Entry
D1345_15170 CDS
T05688
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
crz
Chromobacterium rhizoryzae
Pathway
crz02020
Two-component system
crz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
crz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
D1345_15170
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
D1345_15170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crz03021
]
D1345_15170
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
crz02035
]
D1345_15170
Transcription machinery [BR:
crz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
D1345_15170
Bacterial motility proteins [BR:
crz02035
]
Flagellar system
Flagellar assembly proteins
Stator
D1345_15170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
Sigma70_ECF
GerE
UPF0122
DUF4599
DUF6074
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AXT47443
LinkDB
All DBs
Position
complement(3344134..3344826)
Genome browser
AA seq
230 aa
AA seq
DB search
MYACYDEAPVSAGGEAEALRQYAHLVKRVARQLSSQAGGVFDREDMEQVGLMALLESLRR
YGEPDDKFAGFAILRIRGAILDELRRLDWRPRSVRQEAHRVRDGLRLLSRKLGREPSETE
AMQLLGLSAEAYQEALLADNAEALSSFDELMAQGLEPAAEDNPEQRLALKSALTVALQAL
NPREQQVIQLYYEFELSLKEIAAVLALTEARVCQINKSALKKMQARLQAA
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcctgttacgacgaggccccggtcagcgccggcggcgaagccgaggcgctgcgc
cagtacgcccacctggtcaagcgggtggcgcgtcagctgtcgtcccaggccggcggcgtg
tttgaccgcgaagatatggagcaggtgggactgatggccttgctggagagcctgcgccgc
tatggcgagccggacgacaagttcgccggtttcgccattttgcgcatccgcggcgccatt
ctcgacgaactgcgccggctggactggcggccgcgctcggtgcgacaggaagcgcaccgc
gtgcgcgacggcctgcgcctgctcagccgcaagctggggcgcgaacccagcgagacggag
gcgatgcagctgctgggactcagcgccgaggcctatcaggaagcgctgctggcggacaac
gccgaagcgctgtccagcttcgacgaactgatggcccaggggctggagccggcggcggaa
gacaatcctgaacagcggctggcgctgaaaagcgcgttgaccgtggccttgcaggcgctt
aacccgcgcgagcagcaagtgatccaactgtattacgaatttgaactgagcctcaaggag
atcgcggcggtgctggcgctgaccgaagcccgcgtctgccagatcaacaagagcgctctc
aaaaaaatgcaggctcgcctacaagcggcctga
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integrated database retrieval system
