Chromobacterium rhizoryzae: D1345_15980
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Entry
D1345_15980 CDS
T05688
Name
(GenBank) winged helix-turn-helix transcriptional regulator
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
crz
Chromobacterium rhizoryzae
Brite
KEGG Orthology (KO) [BR:
crz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crz03000
]
D1345_15980
03036 Chromosome and associated proteins [BR:
crz03036
]
D1345_15980
Transcription factors [BR:
crz03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
D1345_15980
Chromosome and associated proteins [BR:
crz03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
D1345_15980
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_24
AsnC_trans_reg
HTH_AsnC-type
MarR
HVO_A0114
MarR_2
DUF7343
HTH_20
NirdL-like_HTH
HTH_11
TrmB
HTH_Mga
Fe_dep_repress
PCI
DDRGK
HTH_IclR
HTH_Crp_2
LexA_DNA_bind
DUF6262
EAP30
Motif
Other DBs
NCBI-ProteinID:
AXT47592
UniProt:
A0AAD0W9N4
LinkDB
All DBs
Position
3518496..3518984
Genome browser
AA seq
162 aa
AA seq
DB search
MKKSASGDKALDKTDLKILRLLQKNGRISMTELSEKVGLSTTPCTERVRRMERDGIIEGY
YARLNPHAMGAALLVFVEIKLEAKSGNIFDAFRREIMRIPEILECHLVSGEFDYLIKARI
PDMSMYRKLLGDILLQLPSAKESKSYVVMEEVKETLLLPLGE
NT seq
489 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaagcgcaagcggcgataaggcactggataaaaccgatctgaaaatcctgcgc
ctgctgcagaaaaacggccgtatctcgatgacggaactctctgaaaaggtgggactttcc
accacgccgtgcaccgaacgagtacgtcgaatggaacgcgacggcatcatcgaaggctat
tacgcccgcctcaatccacatgcgatgggcgcggcgctgttggtcttcgtggagatcaag
ctggaggccaaatccggcaatattttcgacgccttccgtcgcgaaatcatgcgtatcccg
gaaattctggaatgccacttggtgtccggcgaattcgactacctgatcaaagcgcgcatt
ccggacatgtcgatgtaccgcaagctactgggcgacatcctgctacagttgccctctgcc
aaggagtccaaaagctacgtggtgatggaagaggtaaaggagaccctgctactgcctctg
ggagaataa
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integrated database retrieval system
