Chromobacterium rhizoryzae: D1345_19350
Help
Entry
D1345_19350 CDS
T05688
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
crz
Chromobacterium rhizoryzae
Pathway
crz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
crz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
D1345_19350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
crz03400
]
D1345_19350
Enzymes [BR:
crz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
D1345_19350
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
D1345_19350
DNA repair and recombination proteins [BR:
crz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
D1345_19350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
AXT49215
UniProt:
A0AAD0RWV1
LinkDB
All DBs
Position
4233363..4234178
Genome browser
AA seq
271 aa
AA seq
DB search
MPELPEVETTRRGILPHLLNAKLDGAVVRHAGLRWPVPPELHATLRGLTIRSVDRRAKYL
LLGTDAGTLIIHLGMSGSLRFLPADTPPEKHDHVDLLLGPNVLRYRDPRRFGAVLWHVGA
IEHHPLLQALGPEPLSDDFDGDTLIRAAQRRGSAVKLMLMDNHVVVGVGNIYANEALFHA
GIHPARAANTVRDGEYRRLAEEIRSVLNRAIQAGGSTLRDFVHSDGKPGYFQQTYMVYGR
QDQPCRQCGTPIRHLRQGQRSSYYCPLCQPC
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaactgccagaagtcgaaaccacccgccgcgggattctgccccacctcttgaac
gccaaactggacggcgccgtggtccgccacgccggcctgcgttggccggtgccgccggag
ctgcatgccaccctgcgcggcctgacgatacgttccgtcgaccgccgcgccaaatacctg
ctgctgggcaccgacgccggcaccctgatcatccatctgggcatgtccggcagcctgcgt
ttcctgcctgcggacactccaccggagaaacacgaccacgtcgacctgctgttgggcccc
aatgtgctgcgctaccgcgacccgcgacgcttcggcgcggtgctgtggcatgtcggcgcc
atcgagcaccatcccttgttgcaagcgctggggcccgagccgctgtccgacgactttgac
ggcgacacgctgatccgggccgcgcaacgccgcggcagcgcagtcaagctgatgctgatg
gacaaccacgtggtggtcggggtcggcaacatctacgccaacgaggcgctgttccacgcc
ggcatccatccagcacgcgcagccaacacggtgcgcgacggcgaataccgccggctggcc
gaggaaatccgcagcgtgctgaaccgagccatccaggccggcggcagcacgctgcgcgac
ttcgtgcacagcgacggcaagcccggctatttccagcaaacttatatggtgtacggccgg
caggaccagccctgccggcaatgcggcacgccgatccggcatttgcgccagggccaacgc
agttcctactattgtccgctatgccagccatgctag
DBGET
integrated database retrieval system
