Chromobacterium rhizoryzae: D1345_20030
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Entry
D1345_20030 CDS
T05688
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
crz
Chromobacterium rhizoryzae
Pathway
crz03030
DNA replication
crz03410
Base excision repair
crz03420
Nucleotide excision repair
crz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
crz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D1345_20030
03410 Base excision repair
D1345_20030
03420 Nucleotide excision repair
D1345_20030
03440 Homologous recombination
D1345_20030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
crz03032
]
D1345_20030
03400 DNA repair and recombination proteins [BR:
crz03400
]
D1345_20030
Enzymes [BR:
crz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D1345_20030
DNA replication proteins [BR:
crz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
D1345_20030
DNA repair and recombination proteins [BR:
crz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
D1345_20030
NER (nucleotide excision repair)
GGR (global genome repair) factors
D1345_20030
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
AXT48312
UniProt:
A0AAD0WAB8
LinkDB
All DBs
Position
complement(4381250..4384018)
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AA seq
922 aa
AA seq
DB search
MKTLLLIDGSSYLYRAFHAMPDLRSPDGRPVGAVYGMVNMLRRLEKEVQFDYSACVFDAK
GKTFRDDLYPEYKANRPSMPEELASQITAVHEVVQASGWPMLVVPGVEADDVIGTLARTG
AAAGMRVIISTGDKDMAQLVDGLVSIVNTMTNETFDRDGVKDKFGVPPELIVDYLTLIGD
KVDNVPGVDKCGPKTAVKWLEQYGNLDAIIAQAAEVGGKVGENLRAALDWLPKGRELITI
KCDVDLNADMPYGLDSLQHGVKDKPRLAELYQGLGFRTFYREVTEGEDMPAVAQTAAGAQ
GDDLFAIEAAQDSPALPEAVAERRYETILDAVQLDAWLAKLAAAEVVSLDTETTSLDQMQ
ARIIGLSFSVRSGEAAYLPLGHHYAGAPEQLDLEQSLSKLKPWLEDADRKKCGQNLKYDR
HVFANHGIRLAGVIDDSLLASYVVESHERHNMDDLARRHLGESTVSYEEICGKGAKQIGF
GEVDVDTASNYAAEDADITLRLNQYFSGLLTGRLREVYRDIELPVAEVLFTMERHGVLID
RDRLAAQSHQLGTEMLRLESQAYELAGQPFNLNSPKQLQEILFGKLAIPTKGVKKTPSGG
YSTDESVLEALALDHPLPKCILEYRGLAKLKSTYTDKLPLLINAATGRVHTNYAQAVAIT
GRLASSDPNLQNIPVRTPEGRRVREAFIAPPGHVIVSADYSQIELRIMAHLSDDAGMLQA
FASGEDIHRATAAEVFGVELSQVSPDQRRAAKAINFGLIYGMSAFGLAAQLDIERSAAQQ
YIDRYFMRYPGVAEYMQTTRETAREQGYVETVFGRRLYLPEIKLSNPARRAGAERAAINA
PMQGTAADLIKLAMIAVQNWLQDDAMGSKLIMQVHDELVLEVPEAELERVKRRLPEIMAG
VAKLKVPLLAEVGAGESWESAH
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacactgttattgatcgacggctcttcttatttgtaccgcgcctttcacgcgatg
cccgatttgcgctctccggatggccgcccggtgggggctgtctacggcatggtgaacatg
ctcaggcggctggagaaggaagtgcagttcgattatagcgcctgcgttttcgacgccaaa
ggcaagacgtttcgcgacgacctttaccccgaatacaaggccaatcgcccgtcgatgccg
gaggaactcgcctcccagattacggcggtccatgaggtggtgcaagcctcgggctggccg
atgttggtggtgccgggggtggaagccgacgacgtgatcggcacgctggcgagaaccggc
gcggcagccggcatgagggtaatcatttccactggcgacaaggacatggcgcaattggtg
gatggcctggtttccatcgtcaacaccatgaccaatgaaaccttcgaccgggacggggtc
aaggacaagttcggcgtgccgccggaattgatcgtcgactatctgaccctgatcggcgac
aaggtggacaatgtgccgggcgtcgacaagtgcggccccaagaccgcggtcaagtggctg
gagcaatacggcaacctggacgccatcatcgcccaggcggcggaggtgggcggcaaggtg
ggcgagaacctgcgcgcggcgctggactggctgcccaagggccgcgagctgatcaccatc
aagtgcgatgtcgacctgaacgcggatatgccttacggcctggacagcctgcaacatggc
gtcaaggataagccgcggctggccgagttgtaccaaggcctgggcttccgcaccttctac
cgcgaagtgaccgagggcgaggacatgccggcggtggcgcaaaccgcggcaggcgcgcag
ggcgacgatctgtttgccattgaggcggcgcaggacagcccggccttgccggaggcggtg
gcggagcggcgctatgaaaccattctggacgcggtgcagctggacgcctggctggccaag
ctggcggcagcggaggtggtgtcgctggataccgagaccaccagcctggaccagatgcag
gcgcgtattatcggcctcagtttctcggtgcgttccggcgaggccgcctatttgccgttg
ggtcatcactatgccggagcgcctgagcaattggatctggagcaaagcctgtccaagctc
aaaccttggctggaggacgccgacaggaaaaaatgcggccagaacctgaagtacgatcgt
catgtattcgccaatcacggcattcgcctggcgggcgtgatcgacgattccctgctggcc
tcctatgtggtggaaagccatgagcgccacaatatggacgatctggcgcgccgtcacctg
ggcgaatccacggtcagttacgaggagatttgcggcaaaggcgccaagcagatcggtttc
ggcgaggtggacgtggacactgcgtccaactacgcggccgaggacgccgacatcacgctg
cgcttgaatcaatacttctccggcttgctgacaggacgcttgcgcgaggtctaccgcgac
atcgagctgccggtggccgaggtgttgtttacgatggaacgacatggggtgttgatagac
cgcgaccggctagcggcgcaaagccaccaattgggcacggaaatgctgcggctggagagc
caggcttatgaattggccggccagccgtttaatctgaactcgcctaaacagttgcaagaa
atcctgttcggcaagttggccattcccaccaagggcgtgaagaagactccgtccggcggt
tattccactgatgagtcggtgttggaggccttggcgctggaccaccctctgcccaagtgc
attctggaatatcgcggcctggccaagctcaagtccacctacactgacaaattgccgctg
ctgatcaatgctgccaccggccgagtgcatactaattacgcccaagcggtagcgatcacc
ggacgcttggccagctcggaccccaatctgcagaacattccagtgcgcacaccggaaggg
cgtcgcgtgcgggaggccttcatcgcgccgccggggcatgtgattgtcagcgccgactat
tcgcagattgagctacgcatcatggcgcatttatccgacgacgccggcatgctgcaagcc
ttcgccagcggagaggacatccaccgcgccaccgccgccgaggtgttcggcgtggaattg
tcccaagtcagccctgatcagcggcgcgccgccaaggcgattaacttcggcctgatctac
ggcatgagcgccttcggcctggccgcgcagctggacatagagcgcagcgccgcccagcaa
tacattgaccgttacttcatgcgctatccgggcgtggcggagtatatgcagaccacgcgc
gaaaccgcgcgcgagcaaggctatgtggaaaccgtgttcggtcgccgcctctacctgcct
gagatcaagttgtcgaacccggcgcgacgcgccggcgctgaacgcgcggcgatcaacgcg
ccgatgcagggtacggcggcggatctgatcaaactggcgatgatagcggtgcagaactgg
cttcaggacgacgccatgggcagcaaactgatcatgcaggtgcacgacgaactggtgctg
gaagtgccggaagccgagttggagcgggttaagcggcgtttgcctgagatcatggccggc
gtggccaagctcaaggtgccgctgttggcggaggtgggcgcgggggaaagttgggaaagc
gcgcactga
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