Chromobacterium rhizoryzae: D1345_20400
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Entry
D1345_20400 CDS
T05688
Name
(GenBank) pathogenicity island 1 effector protein SipB
KO
K13285
invasin B
Organism
crz
Chromobacterium rhizoryzae
Pathway
crz05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
crz00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
D1345_20400
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
crz02000
]
D1345_20400
Transporters [BR:
crz02000
]
Other transporters
Pores ion channels [TC:
1
]
D1345_20400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SseC
T3SSipB
SH3BP5
Sec8_N
Motif
Other DBs
NCBI-ProteinID:
AXT48377
UniProt:
A0AAD0RTK7
LinkDB
All DBs
Position
complement(4462022..4463776)
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AA seq
584 aa
AA seq
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MSGNTIGQSFNLGSAELAKALSGNTQASEKFVDAAQKSAQALFTMRVSDDAGAAKPRSDL
NTPPLTQPTAKAKEELDGAGKLTLLLGQLMSLLGNVSLSQLESRIATWRAMMDAQAAMGQ
KLSDELQQAIGEAEQATEAYQTALGDLKTAKETLEAAKQKLAQAQAKLDGLTPEDAGYQQ
ALAARDQAANEAQAAKLKADKAEQAATDAHNLAKDKTAKADSLLTQAQGLNTKGGAVQQG
AEDHLTGVAKLTMLMAMFVEMVGKNSEESLKNDLALFQAMQEGRQKEMDKKSAEYQEEVR
KAEELNRTMGCIGKILGAVLTVVSVVAAVFTGGASLALAAVGLALMVADEVVKATTGESF
MEKAMKPIMDAVMAMLKPLMDLVGKIVSETLKAFGVDKSLADTIGSIAGMIYAAVAMVFA
VVAISMVGKGVASKLGGALSKMMGDSMRKMVPTLLKEMAKNGSKVLTQGFQRLANSLGLP
KDAAAKQLMANTLNRVVVGGEVAQAATQAGGNVAQGVFMKNASDMLADFTLARAAMEQIE
QWLKQAVEVFASTQKVTQDLTTMMSSALQQNAEAGRFVLRQSHA
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtaacactatcggtcaaagcttcaatcttggcagtgccgagctggcgaaagcg
ctttcgggcaacacccaggcgagcgagaaattcgtcgacgccgcgcagaagtctgcgcaa
gcgctgttcacgatgcgcgtcagcgacgacgcaggcgccgccaagccgcgcagcgacttg
aacacgccgccgctgacccagcccacggccaaggccaaggaagagctggacggcgcgggc
aagctgacgctgctgctgggacagttgatgtccttgctgggcaacgtttcgctatcgcag
ctggaaagccgtatcgccacctggcgcgcaatgatggacgcgcaagcggcgatgggccag
aagctgtcggatgagttgcagcaggcgataggcgaggcggaacaagccaccgaagcctac
cagacggcgctgggcgatttgaaaacggccaaagaaacgttggaagcggccaagcagaaa
ctggcccaggcccaggccaagctggatggcttgacgccggaagacgccggctatcagcag
gctctggcggcgcgtgatcaagccgccaacgaggcgcaggccgccaagctcaaggccgac
aaggcggaacaggccgctaccgacgcgcacaatctggccaaggacaagaccgccaaggcc
gactcgctgttgacccaggctcaggggctcaataccaagggcggcgcggtgcagcaaggc
gcggaagaccacctgaccggcgtggccaaactgaccatgctgatggcgatgttcgtcgag
atggtgggcaagaacagcgaagaaagcctgaaaaacgatctggcattgttccaggccatg
caggaaggccgccagaaggaaatggacaagaaatccgccgagtaccaggaagaagtgcgc
aaggcggaagaactcaatcgcaccatggggtgcattggcaagattctaggcgcggtgctg
acggtggtcagcgtcgtggccgcagtatttaccggcggcgccagcctggcgctggccgcg
gtgggcctcgcgctgatggtggcggacgaggtggtcaaggccactaccggcgaatccttc
atggaaaaggccatgaagccgatcatggacgccgtcatggcgatgttgaaaccgctaatg
gacctggtgggcaagatcgtcagtgaaacgctaaaggcattcggcgtggataaaagcctt
gcggataccatcggctccatcgccggcatgatttacgccgcggttgccatggtctttgcg
gtggtggcgatctccatggtgggcaagggcgtcgctagcaagctgggcggcgctctgagc
aagatgatgggcgattcgatgcgaaagatggtgcccaccctgctcaaggaaatggccaag
aacggcagcaaggtgttgacccagggcttccagcgcctggccaacagcctgggcctgccc
aaggacgccgcggccaagcaactgatggccaacaccctcaaccgcgtggtggtgggcggg
gaagtggcgcaagccgccacccaggccggcggcaacgtggcgcagggcgtgttcatgaag
aacgccagcgacatgttggccgatttcaccctggcgcgcgccgcgatggagcagatcgaa
caatggctgaagcaggcggtggaagtcttcgccagcacccagaaagtcacccaggacctg
accacgatgatgtcttccgcgttgcagcagaacgcggaagccggccgtttcgtgctgcgt
cagagtcacgcttga
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