Chromobacterium rhizoryzae: D1345_22840
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Entry
D1345_22840 CDS
T05688
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
crz
Chromobacterium rhizoryzae
Pathway
crz02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
crz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
D1345_22840
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
crz02022
]
D1345_22840
02035 Bacterial motility proteins [BR:
crz02035
]
D1345_22840
Two-component system [BR:
crz02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
D1345_22840
Bacterial motility proteins [BR:
crz02035
]
Pilus system
Twitching motility proteins
D1345_22840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
HTH_50
AAA_19
HTH_30
AAA_16
AAA
Motif
Other DBs
NCBI-ProteinID:
AXT48827
UniProt:
A0AAD0RUG0
LinkDB
All DBs
Position
complement(4956638..4957969)
Genome browser
AA seq
443 aa
AA seq
DB search
MAKSSLRVLVIDDEPDIRELLELTLIKMGLDVATAASVGAAKLSLNSQPFDLALTDMRLP
DGEGIEVVRHIAEQGLDVPIAVITAYGNTDNAVLAMKAGAFDYLQKPVSLAQLRSLVKSV
LRVDNGKTEAAVRLDGESPAIQEALRLIGKLARSQAAVYVSGESGTGKEQAARMIHEHSA
RSERPFIPVNCGAIPETLMESEFFGYRKGAFTGADNDRDGFFQQANGGTLFLDEVADLPL
AMQVKLLRAIQEKKVRRLGNAQEEAVDVRIICATHKDLAARVDAGNFRQDLYYRLNVLPL
RMPPLRELREDLPRYIASLLERFSPDEKPRLAPAALKALLEYNYPGNFRELENILERAVA
LANDARIELQDLQLLPSDHAGQGDGEAPTCADGEALQDFLDRVEREAILKALESTRFNRT
QAAKMLGVTFRSMRYRMERLGIK
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggctaaatcttccctgcgcgtgctggtgatcgacgacgaaccggacatccgcgaactg
ctggaactgaccctgatcaagatgggtctggacgtggccaccgccgccagcgtcggcgcc
gccaaactcagcctgaacagccagcccttcgacctggcgctgaccgatatgcgcctgccg
gacggcgagggcatcgaagtggtgcgtcatatcgccgaacagggcctggacgtgcccatc
gcggtgatcaccgcctacggcaacaccgacaacgcggtgctggcgatgaaggccggcgcc
ttcgactacctgcaaaaaccggtcagtctggcgcaattgcgcagtctggtgaaatccgtg
ctgcgtgtggacaacggcaaaaccgaggccgcggtgcggctcgacggcgaatcgccggcg
atccaggaagcgctgcgcttgatcggcaagctggcgcgcagtcaggccgcggtttacgtc
agcggcgaatccggcaccggcaaggaacaggcggcgcggatgatacacgagcacagcgcg
cgctccgaacggccgttcatcccggtcaactgcggcgccatcccggaaacgctgatggaa
agcgaattcttcggctaccgcaaaggcgcgttcaccggcgccgacaacgaccgcgacggt
ttcttccagcaagccaacggcggcacgctgtttctggacgaagtggccgacctgccgctg
gcgatgcaggtcaaactgctgcgcgcgattcaggaaaagaaagtgcgccgcctgggcaac
gcccaggaagaagcggtggacgtgcgcatcatctgcgccacccacaaggacctggcggcg
cgggtagacgccggcaactttcgccaggacctgtactaccggctaaatgtgctgccgctg
cgcatgccgccgctgcgcgaactgcgcgaggatctgccgcgctacatcgccagcctgctg
gaacgcttttcccccgacgaaaagccgcggctggcgcccgcggcgctcaaagccttgctg
gaatacaactatccgggtaatttccgcgaactggaaaacatcctggaacgcgcggtggcc
ctggccaacgacgcccgtattgaattgcaggatctgcaactgctgccgagcgatcacgcc
ggccagggcgatggcgaggcgccgacctgcgccgacggcgaagcgctgcaggactttcta
gaccgcgtggaacgcgaagccatcctcaaggcgctggagagcactcgcttcaatcgcacc
caggccgccaagatgctaggcgtcaccttcagatcgatgcgctatcggatggaaagactg
ggcatcaagtaa
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