Chromobacterium rhizoryzae: D1345_23455
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Entry
D1345_23455 CDS
T05688
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
crz
Chromobacterium rhizoryzae
Brite
KEGG Orthology (KO) [BR:
crz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
crz03016
]
D1345_23455
Enzymes [BR:
crz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
D1345_23455
Transfer RNA biogenesis [BR:
crz03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
D1345_23455
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
AXT48934
UniProt:
A0AAD0RW00
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All DBs
Position
5110573..5112492
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AA seq
639 aa
AA seq
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MNVFYEESGGFKVGSIVSRNDASLQVDTQHGKRAKIKAANVFLEFSSALGDFLPMVEQLA
ADIDLDFLWECCPDDEFGYEALAADYWGRAPSAAEAAAIVSRLYGAPMYFYKKGKGRYKK
APEDALKAALAGLERKKREQEQIDQWVAELKAGQLPEAIRGQLMTLLWKPDKNTLEFKAF
DQAARELSLPPLRLADKVGGISSVPDYLMAGFMLEFFPKGRGFGKYELPALPEDLPLSPV
RAFSIDDANTTEIDDALSVQDLPNGNKRVGIHIAAPSLGIEIGSPLEKLVLSRLSTVYFP
GDKITMLPDDLVDMFTLKEGHDCPALSLYVEVTPEFEPVAYENRIEKVHIAANLRHAALE
QFFNEETLACDPGVDYPFKQELIWFWQFAEALEKRRGKYDPTRPVQMDYNFDVVDGKVLI
TLRKRGAPMDKLVSELMILANSEWGRMLAEADIPGMYRAQSMGKVRMTTRPEPHTGLGVA
QYAWATSPLRRATDFINQRQLMSMIREEKPQFEQGDAMLFAILRDFDTTYSAYLGFQDRM
EHFWCLRWFSQEGVSDPTATFIKEDLVRIDGLPMRVRIPGLPELARGDRIQLSVIRIDEL
MQEIELRCVGVLGHVDAAEDEETEAETTGAVGEAGGQAG
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttttttacgaagagagcggcggctttaaggtcggcagcatcgtttcgcgcaat
gacgctagtctgcaagtggatacccagcatggcaagcgcgccaagattaaggccgcgaat
gtttttctggagtttagttccgcattgggcgattttctgcccatggtagagcaacttgcc
gcggatattgacctggatttcctgtgggaatgctgcccggacgacgagttcggctatgag
gcgttggccgccgattattggggccgcgcgccgtcggcggcggaggccgccgccatcgtg
tcgcgtctgtacggcgcgccgatgtatttctacaaaaagggcaagggccgctacaagaag
gcgccggaagacgcgctgaaggcggcgctggccgggctggaacgcaaaaagcgcgagcag
gagcagatcgaccagtgggtggcggaactgaaagccggccaattgccggaggcgatccgc
ggccagttgatgacgttgttgtggaaacccgacaagaacacgctggagttcaaggccttc
gaccaggccgcgcgcgaactgagcctgccgccgctgcggctggcggacaaggtgggcggc
atctcttcggtgccggactacctgatggccggcttcatgctggaattcttccccaagggc
cgcggtttcggcaagtacgagctgccggcgttgccggaggacttgcccttgtcgccggtg
cgcgccttctccatcgacgacgccaacaccaccgagatcgacgatgcgctgtcggtgcag
gatttgcccaacggcaataagcgcgtgggcatccacatcgccgcgccatcgctggggata
gagatcggctctcctctggagaagctggtgctgtcccgtctgtccaccgtgtatttcccc
ggcgacaagatcaccatgctgccggacgatctggtggacatgttcaccctgaaggaaggg
cacgactgtccggcgctgagcctctatgtggaggtgacgccggagtttgagccggtggcc
tacgaaaaccgcatcgaaaaagtgcatatcgccgccaacctgcgccacgccgcgctggag
cagttcttcaacgaagagacgctggcttgcgatccgggcgtggactatccgttcaagcag
gagctgatctggttctggcagttcgccgaggccttggagaagcgccgcggcaaatacgat
ccgacccggccggtgcagatggactacaacttcgacgtggtcgacggcaaggtgttgatc
accctgcgcaaacgcggcgcgccgatggacaagctggtgtccgagctgatgattctggcc
aacagcgagtggggtcggatgctggccgaggccgacatccccggcatgtaccgcgcgcag
agcatgggcaaggtgaggatgaccacgcggcccgagccgcacaccggcttgggcgtggcc
cagtacgcgtgggccacgtcgccgttgcgccgcgccaccgacttcatcaaccagcgccag
ctgatgtcgatgatccgcgaggagaagccgcagttcgagcagggcgacgcgatgttgttc
gccatcctgcgcgatttcgacactacttactccgcctacctcggcttccaggaccggatg
gagcatttctggtgcctgcgctggttcagccaggaaggggtgtccgatcccaccgccacc
ttcatcaaggaggacttggtgcgcatcgacggcttgccgatgcgggtgcgcatcccgggc
ctgccggaactggcgcgcggcgaccgcattcagctgtcggtgatccgcatcgacgaactg
atgcaggagatcgagctgcgctgcgtcggagtgctcggccatgtcgatgccgccgaggac
gaggagaccgaagcggagacgacgggcgcagtgggcgaggcgggcggccaggccggttga
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