Chromohalobacter israelensis: Csal_0446
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Entry
Csal_0446 CDS
T00347
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
csa
Chromohalobacter israelensis
Pathway
csa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
csa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Csal_0446
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csa03021
]
Csal_0446
03400 DNA repair and recombination proteins [BR:
csa03400
]
Csal_0446
Enzymes [BR:
csa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Csal_0446
Transcription machinery [BR:
csa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Csal_0446
DNA repair and recombination proteins [BR:
csa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Csal_0446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
ABE57808
UniProt:
Q1R0F0
LinkDB
All DBs
Position
491627..492628
Genome browser
AA seq
333 aa
AA seq
DB search
MQRSVTEFLRPRDIKVEEINANHAKIVLEPFERGFGHTLGNALRRILLSSMPGCAVVEAE
IEGVLHEYSAIEGVQEDVIEILLNLKDVAVKMHGNRDEVVLALSKQGPSVVTAGDIAVDH
DVEIVNPDHVIAHLNDSGELKMQLKVVRGRGYEPADTRASEEDESRAIGRLQLDATFSPV
RRVSYSVEAARVEQRTDLDKLIIDLETDGTLDPEEAIRRSATILQEQLAAFVDLEADKEQ
EVEEEEDQIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSL
NEIKDVLAARGLSLGMRLENWPPASLKDDKASA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgttcagtgacagagtttctccgtcctcgcgacatcaaggtcgaagagatcaac
gcgaatcatgcgaagatcgtgctcgagccgttcgagcgtggtttcggccataccctgggg
aatgctctgcgtcgcatcctgctgtcttccatgcccggttgcgccgttgtggaagcggag
attgagggcgttctgcacgagtacagcgccatcgagggcgtccaagaggacgtcatcgag
attctcctgaacctcaaggacgttgccgtcaagatgcacggtaaccgtgacgaggtggtt
ctggcgctgagcaagcaggggccgagcgtggtcaccgctggcgatatcgccgtcgatcat
gacgtcgaaatcgtcaacccggatcacgtcatcgcgcacctcaacgacagcggcgagctg
aaaatgcagctcaaggtggttcgcggtcgtggctacgagccggcggatacccgtgcttcc
gaggaagacgaatcgcgtgcgatcggccgcctccagttggatgcgaccttcagcccggta
cgtcgtgtgtcctactccgtggaagccgcgcgtgtcgagcagcgtaccgacctcgataag
ctgattatcgacttggaaaccgacggcaccctggacccggaagaagcgattcgccgcagt
gcgaccatcctccaagagcagctggccgcgttcgtcgacctcgaagccgataaggaacag
gaagtcgaagaagaagaggatcagatcgatccgattctgctgcgccccgtagacgatctc
gagttgaccgtccgcagcgccaactgcctgaaggccgagaatatctattatatcggtgat
ctgattcagcgtaccgaagtggagctgttgaagaccccgaacctcggcaagaaatccttg
aatgaaatcaaggacgttctggcagcgcgcggtctttccctcggcatgcggctggaaaat
tggccgccggcgagcctgaaggacgacaaggcctctgcgtga
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