Chromohalobacter israelensis: Csal_0448
Help
Entry
Csal_0448 CDS
T00347
Name
(GenBank) Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
csa
Chromohalobacter israelensis
Pathway
csa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
csa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Csal_0448
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csa03400
]
Csal_0448
DNA repair and recombination proteins [BR:
csa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Csal_0448
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Csal_0448
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
nSTAND1
AAA_29
AAA_16
RsgA_GTPase
DnaJ_CXXCXGXG
AAA_22
AAA_21
AAA_23
nSTAND3
NACHT
Viral_helicase1
T2SSE
BCA_ABC_TP_C
Motif
Other DBs
NCBI-ProteinID:
ABE57810
UniProt:
Q1R0E8
LinkDB
All DBs
Position
complement(493135..496008)
Genome browser
AA seq
957 aa
AA seq
DB search
MDRILVRGARTHNLQNIDVELPRNKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSTY
ARQFLSMMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARAGTPRC
PEHGIDLEAQTVSQMVDQVLALPEGSKLMLLAPVVSGRKGEHQQLLTELRAQGYVRAMVD
GQAVELDELGPLEKNKKHDISVVVDRVKVRDGLAQRLAESFETALGLADGIAVVHDMDGE
RDDIVFSARFACPVCGYSIAELEPRLFSFNNPAGACPTCDGLGVRQYFDPDKLISHPELS
LAEGAIKGWDRRSVYYFNQLQAVAEHYRFKLETPWQDLARHEREVVLRGSGHDQITFSYV
NDRGRKVTREHAFEGVLPNMERRYRETESSMVREDLAKYLAVQPCPSCEGTRLRKEARHV
YVDGRPLPEVAHLPIGEAWQYFATLELSGRKGEIAVKIVHEIHSRLEFLVNVGLDYLTLE
RSADTLSGGEAQRIRLASQIGAGLVGVMYILDEPSIGLHQRDNDRLLKTLERLRDLGNTV
IVVEHDEDAIRAADHVLDIGPGAGVHGGRIVAQGTPQQIEQSEESLTGQYLSDQRRIEIP
PHRIPGNPEKMLRLTGANGNNLQNVTLELPLGLFVCVTGVSGSGKSTLINSTLMPVATRE
LNRATSLTPAPYRHIEGLDLLDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFAGTQEA
RSRGYKPGRFSFNVKGGRCEACQGEGMIKVEMHFLPDIYVPCDVCQGKRYNRETLEIHYK
GKNIHEVLEMTIEEALEFFSPVPAIARRLQTLMDVGLSYVRLGQSATTLSGGEAQRVKLA
RELAKRDTGKTLYILDEPTTGLHFEDIRQLLGVLHRLRDHGNTVVVIEHNLDVIKTADWL
IDLGPEGGSGGGRIIAEGTPEQVAKLEQSHTGRFLKPLLDKRTAPANKARTPSTLET
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atggacagaattctggtcaggggtgcgcgcacccacaacttgcagaacatcgacgtcgaa
cttccgcgtaacaagctgatcgtcgtgaccggcttgtccggctccggcaaatcgtcgttg
gccttcgacaccctctacgccgagggacaacggcgctacgtggaatcgctctccacttac
gcccgccaattcctgtcgatgatggaaaagcccgatgtcgaccacatcgaagggctgtcg
ccggcgatttccatcgaacagaagtcgacctcgcacaacccgcgctcgaccgtgggcacg
atcaccgagatctacgactatcttcgcctgctctacgcacgcgccgggacgccgcgctgt
cccgagcacggcatcgacctcgaggcacagaccgtctcgcaaatggtcgaccaggtgctg
gcgctgcccgagggcagcaagctgatgttgctggcaccggtggtcagcgggcgcaagggc
gagcaccagcaactgctgaccgagctgcgcgctcagggttatgtccgcgccatggtcgat
ggccaggccgtcgagctcgacgagctcggaccgctcgagaagaacaagaagcacgacatc
agcgtggtggtcgaccgcgtcaaggtccgcgacggactcgctcagcgtcttgccgagtcc
ttcgagaccgcgctcggtctggccgacggtatcgccgtcgtccatgacatggacggcgaa
cgcgacgacatcgtgttctcggcacgcttcgcctgcccggtatgcggctattcaatcgcc
gagctcgagccgcggctgttctcgttcaacaatcccgccggcgcctgcccgacctgcgac
ggcctcggcgtgcgtcagtacttcgatcccgacaagctgatcagccatcccgaactgtct
ctggcggaaggtgccatcaagggctgggaccggcgcagcgtgtattacttcaaccagctg
caggcagtcgccgagcattatcgcttcaagctcgagaccccatggcaggatctcgcgcgg
cacgagcgcgaggtggtgctgcgcggcagcggtcatgaccagatcaccttcagctacgtc
aacgaccggggccgcaaggtcacccgcgagcatgctttcgagggtgtcctgcccaacatg
gaacggcgctatcgcgaaaccgaatcgagcatggtgcgcgaagacctggccaagtacctg
gccgtgcagccctgtccctcctgcgaggggactcggttgcgcaaggaggcgcgccatgtc
tatgtcgacggccgcccgctgcccgaggtggcacacctgccgatcggcgaagcctggcag
tatttcgcgacactcgagctgtcgggacgcaagggcgagatcgccgtcaagatcgtgcac
gagatccactcacggctggaattcctggtcaatgtggggctcgactacctgaccctggaa
cgcagtgccgacaccctgtcggggggcgaagcccagcgcattcgcctggccagtcagatc
ggtgcgggcctggtcggggtcatgtacattctcgacgagccgtccatcggtcttcatcag
cgcgataacgaccgcctgctcaagacgctcgaacgcctgcgcgacctgggcaacacggtc
atcgtcgtcgagcacgacgaagacgccatccgtgccgccgaccatgtgctcgacatcggg
cccggggccggcgtgcacggaggacgcatcgtcgcacagggcacgccccagcagatcgag
cagagcgaggaatcgctgacaggccagtacctctccgaccagcggcgcatcgagatcccg
ccccatcggatcccgggcaatccggaaaagatgctgcgactcaccggcgccaacggcaac
aacctgcagaacgtgacgctcgaactgcccctggggctgttcgtctgcgtcaccggcgtg
tcgggctcgggcaagtcgacactgatcaactccacgttgatgccggtagccacccgcgaa
ctcaatcgcgccacgtcactgacacccgccccctaccggcacatcgaggggctggatcta
ctcgacaaggtcatcgacatcgaccagagtccgatcgggcgcacgccgcggtccaacccg
gccacctataccggcatcttcacgcccatacgcgagctcttcgctggcacccaggaagca
cgctcgcgcggctacaagccggggcgtttcagcttcaacgtcaagggcgggcgctgcgaa
gcctgccagggcgagggcatgatcaaggtcgagatgcacttcctgcccgacatctacgtg
ccctgcgacgtgtgccagggaaaacgctacaaccgcgagacgctggagatccactacaag
ggcaagaacatccacgaggtactcgagatgaccatcgaggaggccctggaattcttcagc
ccggtcccggcgatcgcccggcgcctgcagacgttgatggatgtgggcttgtcctacgtt
cgccttgggcagagcgcgaccacgctttccggcggcgaagcgcagcgcgtcaagctcgcc
cgcgagctcgccaagcgcgacaccggcaagacgctctacattctcgacgagcccactacc
gggctgcatttcgaggatattcggcaactgctgggggtcctgcaccgcctgcgcgaccat
ggcaataccgtcgtcgtcatcgaacacaacctcgatgtcatcaagacggcggactggttg
atcgaccttggccccgagggaggctcaggcggtggccgcatcattgccgagggcactccg
gaacaggtggccaagctcgagcagtcccacaccgggcgctttctcaagcccttgctggac
aagcgcacggcgccagcgaacaaggcacgcaccccaagcacgctcgagacctga
DBGET
integrated database retrieval system