Chromohalobacter israelensis: Csal_0548
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Entry
Csal_0548 CDS
T00347
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
csa
Chromohalobacter israelensis
Pathway
csa03030
DNA replication
csa03410
Base excision repair
csa03420
Nucleotide excision repair
csa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Csal_0548
03410 Base excision repair
Csal_0548
03420 Nucleotide excision repair
Csal_0548
03440 Homologous recombination
Csal_0548
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csa03032
]
Csal_0548
03400 DNA repair and recombination proteins [BR:
csa03400
]
Csal_0548
Enzymes [BR:
csa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Csal_0548
DNA replication proteins [BR:
csa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Csal_0548
DNA repair and recombination proteins [BR:
csa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Csal_0548
NER (nucleotide excision repair)
GGR (global genome repair) factors
Csal_0548
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
ABE57910
UniProt:
Q1R048
LinkDB
All DBs
Position
606583..609369
Genome browser
AA seq
928 aa
AA seq
DB search
MDADVMANTPPIVLVDGSSYLYRAFHALPPLTTSKGNPTGAVKGVLNMLKSLIKQYPQSP
MAVVFDAKGKTFRDDIYAEYKAHRPPMPDDLRPQVEPLHDCIRALGLPLLCIEGVEADDV
IGTLARQATEAGRDAVISTGDKDMAQLVNAHITLVNTMKGETLDVAGVEEKFGIPPSLVI
DFLALMGDKVDNIPGVPGVGEKTALGLLQGMQGGLDTIYADLERVTTLSFRGAKTMPKKL
EANREQAFLSYQLATIKTDCELPVGLDDLDIAHPDREALKTLYTELEFKNWLNELLEGRD
EGVDDVGSGDAVDAAQGPVASTAEATSRTDHVIVTREAFDAWLARLGEADIFCFDLETTS
LNYMEADIVGIGLSLDAGEAAYIPVAHRYLDAPEQLDRASVLAALKPLWEDPAKAKIGQN
LKYDISVLARYDIEVAGRLEDTMLASYVLNATATRHDMDSLALKYLGEKTISFEEIAGKG
AKQLTFDQIALEQAAPYACEDVDITLRLHRELRPRVDGEGRLAAVLDDIELPLVPVLSRM
ERNGVALDAERLHAQSRELEKRLRELETRAYELAGREFNLGSPKQLGEILFDELKIPVIK
KTPKGAPSTAEAVLEELALDYPLPKVIIEHRGFAKLKSTYTDKLPQLVNATTRRLHTSYH
QAVTATGRLSSSDPNLQNIPIRTEEGRKIRQAFVARPGYRIVAADYSQIELRIMAHLSGD
KGLLDAFAEGRDIHTATAAEVFGVALDAVSGEQRRSAKAINFGLIYGMSAWGLGRQLHIE
RNQAQTYIDRYFDRYPGVARFMERIRAQAADDGYVETVFGRRLYLPEINAQNRTRRQAAE
RTAINAPMQGTAADIIKLAMIDVDRWLREGDFDAWMVMQVHDELVFEVKEAQVDAFTDAV
RQRMEGAAKLDVPLTVEANAGDNWDEAH
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggatgctgatgtcatggccaatacgccccccatcgttctcgtcgacggctcgtcgtat
ctgtatcgggcttttcatgccttgccgccgctgaccacgtccaaggggaaccccaccggg
gcggtgaagggcgtgctcaacatgctcaagagcctgatcaagcagtatccacaaagtccc
atggcggtggtcttcgatgccaagggcaagaccttccgcgacgatatctacgccgagtac
aaggcgcaccgtccgccgatgcccgacgatctgcgcccgcaggtcgagcccctgcacgac
tgcattcgcgcgctgggcctgccgctgttgtgcatcgagggcgtcgaggccgacgacgtg
atcggcaccctggcacgccaggccaccgaggcggggcgcgacgcggtgatttccaccggt
gacaaggacatggcgcagctcgtcaatgcccacatcacgctggtcaacaccatgaagggc
gagacgctcgacgtggccggcgtcgaggaaaaattcggcattccgccgtcgctggtcatc
gacttcctggccctgatgggcgacaaggtcgacaatatccccggcgtgcccggcgtcggc
gagaagacggcgctcggcctgctgcaaggcatgcagggcgggctggacaccatctacgcc
gacctcgagcgtgtcaccacgctgtcgtttcgcggcgccaagacgatgcccaagaagctc
gaggccaaccgtgagcaggccttcctgtcgtatcaactggccaccatcaagaccgactgc
gagctgccggtggggctcgatgacctggatatcgcgcaccccgaccgcgaggcgctcaag
acgctgtacaccgagctggaattcaagaactggctgaacgagctgctcgaggggcgcgac
gagggcgtcgacgatgtcggttcgggcgatgcggtggatgccgcgcaggggcccgtggcg
agtactgccgaggcgacgtcgcgcacggatcacgtcatcgtcacccgcgaggccttcgat
gcctggcttgcgcgcctgggcgaggcggacatcttctgcttcgacctggaaaccaccagc
ctcaattacatggaggccgatatcgtgggaatcggcctgtcgctggacgccggcgaagcg
gcctacatcccggtggcgcaccgctatctcgacgctcccgagcagctcgaccgcgcgtcg
gtgctcgccgcgctcaagccgctctgggaagaccccgccaaggccaagatcggccagaac
ctcaagtacgacatttccgtcctggcacgctacgacatcgaggtcgcgggacggctcgag
gacaccatgctggcatcctacgtgctcaatgccacggcgacgcggcacgacatggactcg
ctggcgctcaagtacctcggcgagaagaccatttccttcgaggagatcgccggcaagggg
gccaagcagttgaccttcgaccagattgcactggagcaggctgccccctacgcctgcgag
gacgtcgacatcaccttgcggctgcaccgggaactgcgcccgcgcgtggatggcgagggc
cggctggcggcggtgctggacgacatcgaactgcccctggtgccggtgctctcgcgcatg
gagcgcaacggggtggcactggatgccgagcgcctgcacgcgcagagtcgcgagctggag
aagcgcctgcgggaactggaaacccgcgcctatgagctggccggacgcgagttcaatctc
ggctcgcccaagcagctcggcgagattctcttcgatgagctcaagatcccggtgatcaag
aagacgcccaagggcgcgcccagcaccgccgaggcggtgctcgaggaactggcgctggat
taccccttgcccaaggtgatcatcgagcatcgcggcttcgccaagctgaagtcgacctac
accgacaagctgccgcaactggtcaatgccaccacgcggcggctgcataccagctatcac
caggccgtgacggccaccgggcgcctgtcgtcgtccgaccccaacctgcagaacattccc
atccgtaccgaagaaggccgcaagatccgccaggccttcgtcgcgcgccccggctaccgc
atcgtcgctgccgactattcgcagatcgagctgcgcatcatggcgcatctttccggcgac
aagggactgctcgatgccttcgccgaaggacgcgacatccataccgccaccgcggcggaa
gtgttcggcgtggcgctcgacgccgtcagcggcgagcaacggcgcagcgccaaggccatc
aacttcggtctgatctacggcatgagcgcctggggactggggcgccagctgcacatcgag
cgcaatcaggcgcagacctacatcgaccgctacttcgatcgttaccccggcgtggcgcgc
ttcatggaacgcattcgtgcccaggccgccgacgacggttacgtcgagacggtcttcgga
cgtcgcctctatctgcccgagatcaatgcccagaaccggacccggcgtcaggctgccgag
cgcaccgccatcaatgcgccgatgcaggggaccgccgccgatatcatcaagctggcgatg
atcgatgtcgaccgctggttacgcgaaggcgacttcgacgcctggatggtgatgcaggtt
cacgacgaactggtcttcgaggtcaaggaggcgcaggtcgatgccttcaccgacgccgtt
cgccagcgcatggaaggcgccgccaagcttgacgtgccgctgaccgtcgaagccaacgcc
ggcgacaactgggacgaagcgcattga
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