Chromohalobacter israelensis: Csal_0817
Help
Entry
Csal_0817 CDS
T00347
Name
(GenBank) DEAD/DEAH box helicase-like protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
csa
Chromohalobacter israelensis
Pathway
csa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Csal_0817
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csa03019
]
Csal_0817
Enzymes [BR:
csa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Csal_0817
Messenger RNA biogenesis [BR:
csa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Csal_0817
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
P-loop_SecA
Utp25_C
AAA_25
AAA_22
Peptidase_M30
Motif
Other DBs
NCBI-ProteinID:
ABE58174
UniProt:
Q1QZD4
LinkDB
All DBs
Position
complement(911693..913051)
Genome browser
AA seq
452 aa
AA seq
DB search
MSFTSLGLSAPILDAVAEQGYETPSPIQAKAIPAVLEGRDVMAAAQTGTGKTAGFTLPIL
ERLAAGTRAPGKQVRALILTPTRELAAQIGANIEAYGKHLPLRSAVVFGGVKINPQIAKL
RGGVDILVATPGRLLDLHGQKAVNFDALDVLVLDEADRMLDMGFIHDIRRILKTLPSKRQ
NLLFSATFSQEIRQLAKGLVNDPVEISVTPRNTTAETVTQWIHPVDKARKPALLTHLIHE
HQWQQVLVFMRTKHGANRLSRHLEEAGIEAAAIHGNKSQNARTKALDGFKSGEIRVLVAT
DIAARGLDINQLPQVVNFELPNVAEDYVHRIGRTGRAGASGHAISLVCAEEGKELAGIER
LIRQTLERQTIAGFEPSEALVSGKGTSPRGGGGQRSDKPSGGGQRRGGDARKSGSGKQGG
NDNPAARERNGGENRPRRRRGGRGRGNGTQGA
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgagctttacctccctggggctttccgctccgattctggatgccgtggccgagcaaggc
tacgagacaccctcgccgatccaggccaaggcgattccggccgtcctcgaaggacgcgac
gtcatggccgccgcgcagaccggcaccggcaagaccgccggtttcacgctgccgattctc
gagcgcctggccgccggcacgcgcgcgcccggcaagcaggtccgcgccctgattctcacg
ccgacccgcgagctcgccgcccagatcggcgccaacatcgaagcgtacggcaagcacctg
ccgctgcgtagcgccgtggtcttcggcggtgtgaagatcaatccacagatcgccaagctg
cgcggcggtgtggatatcctggtggcgacaccgggccgtttgctggatctccacggccag
aaagccgtgaacttcgatgccctggacgtgctggtgctcgacgaagccgaccgcatgctc
gacatgggcttcattcacgatatccgtcggatcctcaagaccctgcccagcaagcgtcag
aacctgctgttctcggcgaccttttcccaggagattcgccaactcgccaagggcctggtc
aacgacccggtggaaatttcggtcacgccgcgcaacaccaccgccgagacggtcacccag
tggattcacccggtggacaaggcccgcaagccggcactgctgacgcacttgatccatgaa
catcagtggcaacaggtgctggtcttcatgcggaccaagcacggcgccaaccgcttgagc
cgtcatctcgaagaggccggcatcgaggcggcggcgattcacggcaacaagagtcagaac
gcgcgcaccaaggcgctcgatggcttcaagagcggcgagattcgtgtcctggtcgccacc
gacatcgccgcgcggggcctggatatcaaccagctaccgcaggtggtcaatttcgagctg
cccaacgtcgcggaagactacgtgcaccgtatcgggcggaccggacgcgccggcgccagc
ggccatgccatttcgctggtctgtgcggaggaaggcaaggaactcgcgggcatcgagcgc
ttgatccgccagacgctggaacgacagaccatcgccggcttcgagcccagcgaagctctc
gtcagcggcaagggcaccagcccccgcggtggcggcggccagcgcagcgacaagccctcg
ggaggcggtcagcgccggggcggcgacgcacgcaagagcggttcgggcaagcaaggcggc
aacgacaaccccgccgcgcgcgagcgcaacggcggcgagaatcgtccacgccggcgtcgc
ggcggccgggggcgaggcaacggcacccagggcgcctga
DBGET
integrated database retrieval system
