KEGG   Chromohalobacter israelensis: Csal_0979
Entry
Csal_0979         CDS       T00347                                 
Name
(GenBank) Exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
csa  Chromohalobacter israelensis
Pathway
csa03030  DNA replication
csa03430  Mismatch repair
csa03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:csa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Csal_0979
   03430 Mismatch repair
    Csal_0979
   03440 Homologous recombination
    Csal_0979
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:csa03032]
    Csal_0979
   03400 DNA repair and recombination proteins [BR:csa03400]
    Csal_0979
Enzymes [BR:csa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Csal_0979
DNA replication proteins [BR:csa03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Csal_0979
DNA repair and recombination proteins [BR:csa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Csal_0979
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2
Other DBs
NCBI-ProteinID: ABE58336
UniProt: Q1QYX2
LinkDB
Position
1097939..1098664
AA seq 241 aa
MKRSSSRHSKTPATWADYFTARREQTRVPALERYFAAGAPAPDTPLGEVPMMAMDMETTG
LDEQRHAIVSIGLVPFDLRRIRMAQRRYWIVRPPRPLSERSITFHHITHTEIEQAPDLDE
ILDELLEAMAGHVMVVHYRHIERTFLNAAVKARRGEGIHFPVIDTMSLEARLHRQPLWAR
FRRWMGRPPASIRLPDSRTRYGLPPYQAHHALIDALATAELLQAQIAHHYRPDTPLSEVW
N
NT seq 726 nt   +upstreamnt  +downstreamnt
atgaaaagatcgtcctcacgccattcgaaaacgcctgccacctgggcggactatttcacc
gcacgtcgcgagcagacacgcgtgccggcactcgagcggtatttcgccgctggcgcgccg
gcaccggacacgccgcttggcgaggtgccgatgatggccatggacatggagaccaccggt
ctcgatgaacagcgtcacgccatcgtcagtatcggcctggtgccgttcgacctgcggcgt
atccgcatggcgcagcgccggtactggatcgtgcgcccgccgcgcccgttgagcgagcgc
tcgatcacttttcatcacatcactcacaccgagatcgagcaggcgccggacctcgacgag
atcctcgacgagctgctagaggccatggccgggcatgtcatggtggtgcattaccggcat
atcgaacgcacctttctgaatgcggccgtcaaggcgcggcgtggcgaggggatccacttc
ccggtgatcgataccatgtcgctggaagcacgcctgcaccgccagcccttgtgggcgcgc
tttcggcgctggatggggcgtccaccggcctcgatccggctgcccgacagtcgcacgcgc
tatgggctgccgccttatcaggcgcaccatgccctgatcgacgccctcgccactgcggag
ctgctgcaggcacagatcgcgcatcactatcgcccggacacgccgttgagcgaggtatgg
aactga

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