Chromohalobacter israelensis: Csal_1225
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Entry
Csal_1225 CDS
T00347
Name
(GenBank) Ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
csa
Chromohalobacter israelensis
Brite
KEGG Orthology (KO) [BR:
csa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csa03016
]
Csal_1225
Enzymes [BR:
csa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
Csal_1225
Transfer RNA biogenesis [BR:
csa03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Csal_1225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
ODP
Motif
Other DBs
NCBI-ProteinID:
ABE58580
UniProt:
Q1QY78
LinkDB
All DBs
Position
complement(1403466..1405406)
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AA seq
646 aa
AA seq
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MLQNNSALAQLKQQIRETTPRVQGVIKATDRGFGFLEADDGSSYFVPPPAMKQVLHGDRV
DALLKQEGDKTSVEPDTLIEAGLDRFVARLVKRDGRLSVVPDHPSINNQLRARLKNSLDE
STLGDGDWVVARLVRHPLKPDDRGFFAQVDELVVKADNPAVPWRVTLARHALEQASPQFG
EQWPLHDEGLEREDLTATPFFTIDGEKTRDMDDALYIETLEDGWRLSVAIADPTAYVREG
DAVDREAQTRAFTVYLPGQNVTMLPELLADDLCSLKEGEERPTLVCTLDVHRDGSLGEYR
FFAAQVRSQARLVYDQVSDWLEGQGDWAPADDTIATQLQALAEMTKARNAWREQHTLVFK
DRPDYVFDVDDAGNVLAVRIEERRVAQRMIEESMIAANACCADLLAAHVGHGIFNVHQAF
EPEKADQAIEFLANQDISVEREQLLELSRYRELRRALEAREDAWLDARLRRFQGYTNMSA
QPGPHFGLGLSAYATWTSPIRKYGDMVNHRLIKRVLKGEAAPAEASQALTEQLTERRRLN
RMAERDVKDWLYVRYLGPAAEAGEVFEADIIAINRGGMRVRLTANGATAFVPAPFMHSDR
DKVAIDDKEGRIQIEGEPRYKLGDTIKVALAEAVESTRSLVARPAA
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagaacaactccgcgcttgcccagctcaagcaacagattcgtgaaacgacgccc
cgcgtgcagggcgtcatcaaggcaaccgaccggggctttggctttctcgaagccgacgac
ggcagttcctacttcgttccgccccccgccatgaagcaggtcttgcatggcgatcgcgtc
gatgccctgctcaagcaggagggggacaagacctccgtcgagcccgacacgctcatcgaa
gcggggctcgaccggttcgtggcgcgcctggtcaagcgcgacggacgtctcagcgtggtg
ccggaccatccgtccatcaacaaccagctgcgcgcacgcctcaagaactcgctcgatgaa
agtaccctgggcgacggcgactgggtggtggctcgtctggtgcgccatcctctcaagccc
gacgatcgcgggttcttcgcgcaagtcgacgagctggtggtcaaggccgacaaccccgcg
gtcccctggcgcgtgaccctggcgcgtcatgcgctggagcaagcctcaccgcaattcggc
gaacaatggccgctgcacgatgaagggctcgaacgcgaagacctcaccgcgacgcccttt
ttcaccatcgatggtgaaaagacgcgcgacatggacgacgccctgtacatcgagacactc
gaggacggctggcgtctcagcgtggcgatcgccgaccccacggcttacgtgcgcgaaggc
gacgcggtcgatcgcgaggcgcagacccgtgccttcacggtgtatctgccgggccagaac
gtcaccatgttgccggagctgctcgccgatgacctctgctccctgaaggaaggtgaagag
cggccgaccctcgtctgcactctggacgtccatcgcgatggcagcctcggcgaataccgc
tttttcgccgcgcaggttcgctcgcaggcacgcctggtgtacgaccaggtctccgattgg
ctggaaggccaaggcgactgggcgcccgccgacgacaccatcgccacccagctccaggcg
ctggccgagatgaccaaggcccgcaacgcttggcgtgaacagcacacgctggtcttcaag
gatcgccccgactacgtcttcgatgtcgacgatgccggcaacgtgctggcggttcgcatc
gaggagcggcgcgtcgcgcagcgcatgatcgaggaatcgatgattgccgccaatgcgtgc
tgcgccgacttgctcgcggctcacgtgggacacggcatcttcaatgtgcaccaggccttc
gagcccgagaaagccgatcaggccatcgagttcctggccaatcaggacattagcgtggag
cgcgagcaactgctggagctctcgcggtatcgcgaactgcgtcgcgcgctcgaggcccgc
gaggacgcctggctcgacgcgcgcctgcgccgtttccaggggtataccaacatgtccgcg
cagccgggcccgcatttcggcctgggactgtcggcgtacgccacctggacctcaccgatc
cgcaagtacggcgacatggtcaaccaccgcctgatcaagcgtgtactcaagggagaagcg
gcccccgccgaggcgagccaggcactgaccgagcagctcaccgagcggcggcgactcaat
cgcatggcggagcgcgacgtcaaggattggctctacgtgcgctacctcggccccgccgcc
gaagccggcgaggtcttcgaggcggatatcatcgccatcaaccgcggcggcatgcgagtg
cgcctgacggccaacggtgccacggccttcgtgccggcgccgttcatgcacagcgatcgc
gacaaggttgccatcgacgacaaggaaggtcgcatccagatcgagggcgagccacgctac
aagctcggcgacaccatcaaggtggccctggccgaagcggtcgagtcgacacgctcgctg
gtggcacgccccgccgcctga
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