Chromohalobacter israelensis: Csal_2074
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Entry
Csal_2074 CDS
T00347
Name
(GenBank) beta-lactamase-like protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
csa
Chromohalobacter israelensis
Pathway
csa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Csal_2074
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csa03019
]
Csal_2074
Messenger RNA biogenesis [BR:
csa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Csal_2074
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
ABE59425
UniProt:
Q1QVT3
LinkDB
All DBs
Position
2343089..2344771
Genome browser
AA seq
560 aa
AA seq
DB search
MSQPRIQVRARRKPPLHMLPLGGCGEIGMNFTLYGHQDHWIVVDCGMMIRQDLPQAPLQV
PNVDMLASQNIVPRAIVVTHGHEDHIGAIAWLWPRWQCPVHATPLAAGLLRLRFAEQQLP
TSAIQVITPGDAMESGPFDIRFLPLPHSIPESCALLLTTPQHRILHTGDWKLDPEPLIGK
PASPQRFQALAPVDLVVGDSTNAPVPGHSRSEGEVARALETTIGACPGRVIVSCFASNLA
RILALGRAAHACGRRVSLMGRSMERMVGVARGLGYLEDFPPLVPVRDLGYLPPEEVLVIA
TGSQGEPRAALSRLAQGRHADFELHPGDSVIFSAKAIPGNELLIERLQAGLKRAKVTIFD
ERSHPELHASGHPAQAELRRFYEWVKPRRLLPVHGEQQHQQAHRALAESLGIEVPWIPRN
GDMLRLDAEGLHCESRHSLAPHIVTQNRIHPLEGLRAPEASSMHRRSGILSLTLPVVRQS
TGWVRIGRLLWDTSHDLPLDDVALADWVDEQLAGHDADTIVTLRQRLHGPLMHWLGDHLR
HLPDVHLHIMAAEGDTVYDA
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagccacgcatccaggttcgcgcccgtcgaaagcctcccctgcatatgctaccg
ctcggtggttgcggtgaaatcggcatgaatttcacgctttacggccaccaggatcattgg
atcgtcgtcgattgcggcatgatgattcgccaggatctcccgcaggcaccgcttcaggtt
cccaacgtggacatgctggcgtcgcagaacatcgttccccgggccatcgtcgtgacgcac
gggcatgaagatcatatcggcgcgatcgcctggctctggccccgctggcaatgccccgtg
catgccacgcccctcgccgccggcttgctgcgcctgcgttttgccgagcagcaattgccc
accagcgccatccaggtcatcacgcccggtgacgccatggaaagcgggccgttcgacatt
cgtttcctgccgctgccgcactcgattcccgaaagctgcgcgctgctgctgacgacgccc
cagcaccggatattgcacaccggcgactggaagctcgaccccgaacctctgatcggcaag
ccggcatcccctcaacgcttccaggcgcttgccccggtcgatctggtggtcggcgactcc
accaatgcccccgttcccggtcactcgcgcagcgagggtgaggtcgcgcgcgccctggag
accacgataggcgcatgcccgggacgcgtgatcgtcagctgctttgccagcaatctggcg
cgaatcctggcgctgggacgcgccgcgcatgcctgcggacggcgcgtgagcctgatggga
cgctcgatggaacgcatggtgggcgtcgcacgcgggctcggctacctggaggactttccg
ccgctggtgccggtacgcgatctcggctacctgccgcccgaggaagtgctggtcatcgcc
accggcagtcagggagaaccccgtgccgcgctttcgcggctcgcgcaggggcggcatgcc
gatttcgaattgcaccccggcgacagcgtgatcttttcggccaaggcaatcccgggcaac
gaactgctcatcgaacgcctgcaggccggcctgaagcgtgccaaggtcacgattttcgac
gaacgcagccaccccgaactgcatgcctcgggacaccccgcacaagcggaattgcgccgt
ttttacgaatgggtcaagcctcgacgcctgctgcccgtgcatggcgagcagcaacatcaa
caggcccatcgtgcgctggcggaatcgctgggcatcgaggtgccctggattccccgcaac
ggcgatatgctacgtctcgacgccgagggcctgcactgcgagtcacgccactcgctggcg
ccgcacatcgtcacgcagaaccgcattcaccccctggaaggactgcgtgctcccgaggcc
tcgagcatgcatcgacgcagcgggattctgagcctgaccctgccggtcgttcgccaatcc
actggatgggtacggatcggacgactgctctgggataccagccacgacctgcctctggac
gacgtggctctcgccgactgggtcgacgagcagctcgcaggccacgacgcggataccatc
gtcaccttgcgccagcgcttgcatggccccttgatgcactggctgggcgaccatctgcgc
caccttcccgacgtgcacctgcacatcatggccgcggaaggcgataccgtttacgatgcc
tga
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