Chromohalobacter israelensis: Csal_2160
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Entry
Csal_2160 CDS
T00347
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
csa
Chromohalobacter israelensis
Pathway
csa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Csal_2160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csa03019
]
Csal_2160
03110 Chaperones and folding catalysts [BR:
csa03110
]
Csal_2160
03029 Mitochondrial biogenesis [BR:
csa03029
]
Csal_2160
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csa04147
]
Csal_2160
Enzymes [BR:
csa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Csal_2160
Messenger RNA biogenesis [BR:
csa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Csal_2160
Chaperones and folding catalysts [BR:
csa03110
]
Heat shock proteins
HSP60 / Chaperonin
Csal_2160
Mitochondrial biogenesis [BR:
csa03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Csal_2160
Exosome [BR:
csa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Csal_2160
Exosomal proteins of other body fluids (saliva and urine)
Csal_2160
Exosomal proteins of breast cancer cells
Csal_2160
Exosomal proteins of colorectal cancer cells
Csal_2160
Exosomal proteins of bladder cancer cells
Csal_2160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ABE59511
UniProt:
Q1QVJ7
LinkDB
All DBs
Position
2428116..2429759
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKQIKFSDDARKRMARGVNVLADAVKVTLGPKGRNVVLEKSFGSPTVTKDGVSVAKEI
ELKDKFENMGAQMVKEVASKTSDVAGDGTTTATVLAQSIVTEGMKGVTAGMNPMDLKRGI
DQAVDAAVKEIQSLSVPCTDAKAIAQVGTISANGDKRIGEIIADAMQKVGKEGVITVDEG
RGFEDELEVVEGMQFDRGYLSPYFVTNQDTMMVELEDPYLLMVDKKISNIRELLPVLEAV
AKSGKPLGIIAEDIEGEALATLVVNTMRGIVKAAATKAPGFGDRRKAMLQDIAILTGGTV
ISEEVGLTLEQANLDHLGSAKRVTMSKENTTIIDGAGVEADIEARVSQIRAQIEDTSSDY
DREKLQERVAKLAGGVAVIRVGAATEFEMKEKKARVEDALHSTRAAVEEGVVPGGGTALV
RILNKLVDLKGDNEDQTHGIAIALRAMEAPLRQIVTNAGQEASVIVNQVKAGEGNYGYNA
QTGEYGDLFDMGVLDPAKVTRSALQSAGSVAGLMITTEAMIADDPDEKEAGGGAPDMGGM
GGMGGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaacaaatcaaattctccgatgatgcccgcaagcgcatggcgcgtggtgtt
aacgttctggctgatgcggtcaaggtaactctcggtccgaagggacgtaacgtcgtactg
gaaaagtccttcggctctcccaccgtgaccaaggacggtgtatccgtcgccaaggaaatc
gaactcaaggacaagttcgagaacatgggcgcacagatggtcaaggaagtcgcttccaag
acctctgacgtggccggcgacggcaccaccacggcaaccgtcctcgcgcagtccatcgtc
accgagggcatgaagggcgtcaccgccggcatgaacccgatggacctcaagcgtggcatc
gaccaggccgtcgacgccgccgtcaaggaaatccagtcgctttccgtgccctgcaccgat
gccaaggccatcgcccaggtcggcaccatttccgccaatggcgacaagcgtatcggcgaa
atcattgccgatgccatgcagaaggtcggcaaggaaggcgtcatcaccgtcgatgaaggt
cgcggcttcgaagacgagctggaagtcgtcgaaggcatgcagttcgatcgcggttacctg
tcgccctacttcgtgaccaaccaggacaccatgatggtggaactggaagatccgtacctg
ctgatggtcgacaagaagatctccaacatccgcgaactgctgccggtgctggaagccgtc
gccaagtccggcaagccgttgggcatcatcgccgaggacatcgaaggcgaagcgctggcc
accctggtggtcaacaccatgcgcggcatcgtcaaggccgcggcgaccaaggcgcccggc
ttcggtgatcgtcgcaaggccatgctgcaggacatcgccatcctcaccggtggtaccgtg
atttccgaggaagtcggcttgaccctcgagcaggccaacctggaccacctgggtagcgcc
aagcgcgtcaccatgtccaaggaaaacaccaccatcatcgacggtgccggtgtcgaagcc
gatatcgaagcgcgcgtcagccagattcgcgcccagatcgaagacaccagctccgattac
gatcgcgagaagctgcaggagcgtgtcgccaagctggccggcggtgtcgcggtcatccgc
gtgggcgcagccaccgagttcgagatgaaagagaagaaggctcgcgtcgaagacgcgctg
cactcgactcgtgctgccgtcgaggaaggcgtggtgccggggggcggtaccgctctggtc
cgcatcctgaacaagctcgtcgacctcaagggcgacaacgaagaccagacccacgggatt
gccatcgccctgcgcgccatggaagccccgctgcgtcagatcgtgaccaacgcgggtcag
gaagcgtccgtcatcgtcaaccaggtcaaggccggcgaaggtaactacggttacaacgca
caaaccggcgagtatggcgacctgttcgacatgggcgttctcgacccggccaaggtcacg
cgcagcgcgctgcagtccgctggttccgtggcgggtctgatgatcaccaccgaagccatg
atcgccgacgacccggacgagaaagaagccggtggcggcgcaccggacatgggcggcatg
ggaggcatgggcggcatgatgtaa
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