Chromohalobacter israelensis: Csal_2969
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Entry
Csal_2969 CDS
T00347
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
csa
Chromohalobacter israelensis
Pathway
csa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
csa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Csal_2969
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csa03400
]
Csal_2969
Enzymes [BR:
csa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Csal_2969
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Csal_2969
DNA repair and recombination proteins [BR:
csa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Csal_2969
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
ABE60314
UniProt:
Q1QT94
LinkDB
All DBs
Position
complement(3308866..3309711)
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AA seq
281 aa
AA seq
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MPARTWRGACMPELPEVETTRRGIAPHVEGREIREIIVRQPRLRTPVPDDLADTLVGHRI
GELGRRAKYLLMPVGAGTLLWHLGMSGSLRLARLGDLPRKHDHVDLVLEGGAILRYHDPR
RFGFVDWLQGSPLDDPRLARLGPEPLSPDFDGERLYRLSRKRRVAVKPFLMDNAVVVGVG
NIYASEALFLAGIDPRRAAGRISRERYERLAEAARDVLAAAITQGGTTLRDFVSGTGEPG
YFAQRLNVYGRHDAPCRRCGELLRLVTLGQRASVFCPHCQR
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgccggcaagaacgtggcgaggtgcctgcatgcctgaacttcccgaagtcgagacgacg
cgccgaggcatcgcgccgcatgtcgaggggcgtgaaattcgtgagatcatcgtgcgccag
ccgcgcctgcgcacgccggtgccggacgatctggcggacaccctcgtcggccaccgcatc
ggtgaactcgggcggcgcgccaagtacctgctgatgccggtcggcgcaggcaccttgctg
tggcatctggggatgtccggcagtctgcgcctggcgcgcctcggcgatctgcccaggaag
cacgaccatgtcgatctggtgctggaaggcggtgcgatactacgctaccacgatccgcgc
cgtttcggattcgtggactggctgcaggggtctcccctcgacgatccacgcctggcgcgc
ctggggcccgagccgttgtcgcccgacttcgacggcgagcgtctctaccgcctgtcgcgc
aagcggcgcgttgccgtcaagccgtttctgatggataacgcggtggtggtgggagtcggc
aacatctacgcgagcgaagcgctgtttctcgcgggcatcgatccgcggcgcgcggccggg
cgtatctcgcgcgagcgctacgaacgtctggccgaggcggcgcgcgacgtgctggcggcg
gcgatcacccagggtggcacgaccttgcgcgacttcgtcagcggcaccggcgaacccggc
tacttcgctcagcgcctcaacgtctatggacggcacgatgccccctgtcggcgttgcggc
gagcttcttcgcctggtaacgctgggtcagcgtgccagcgtcttctgtcctcactgtcag
cgttga
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