Chromohalobacter israelensis: Csal_2986
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Entry
Csal_2986 CDS
T00347
Name
(GenBank) RNA polymerase, sigma 32 subunit, RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
csa
Chromohalobacter israelensis
Brite
KEGG Orthology (KO) [BR:
csa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csa03021
]
Csal_2986
Transcription machinery [BR:
csa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Csal_2986
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
KORA
GntR
UCR_14kD
Sigma70_r1_2
ImpA_N
SpoIIID
Motif
Other DBs
NCBI-ProteinID:
ABE60331
UniProt:
Q1QT77
LinkDB
All DBs
Position
complement(3324939..3325805)
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AA seq
288 aa
AA seq
DB search
MSTSLQPVGHLSPGHDLNGYIQAVNRIAVLSSEEERELGFRLYEQGDLEAARRLVMSHLR
FVVHIARSYSGYGLPQADLIQEGNVGLMKAVKRFDPTQGVRLVSFAVHWIKAEIHEYVLR
NWRIVKIATTKAQRKLFFNLRGAKKRLAWLNNDEVDAIAKDLDVKPQVVREMEGRLSAFD
AGYDATPSEEEDQGYQAPAHYLDDERFDPAAQLEAADWEEDSTHRLQAALGELDERSRDI
LQRRWLAESKATLHELADVYGVSAERIRQLEKNAMKKIKQQLGDTLAA
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccagtcttcagcccgtgggtcatctttctcccggtcatgacctgaatggctac
attcaggccgtcaatcgcattgccgtgctgtcctccgaggaggagcgcgagttggggttc
cgcctctacgaacaaggtgatctcgaagccgcgcggcgtctggtcatgtcgcatttgcgc
ttcgtggtgcatatcgcccgcagttattccggctatgggctgccccaggccgatttgatc
caggaaggcaacgtcggcctgatgaaggccgtcaagcgtttcgatccgacgcagggcgtg
cgcctcgtgtcgtttgccgtgcactggatcaaggccgagattcacgagtacgtgctgcgt
aactggcgcatcgtcaagatcgccaccaccaaggcgcagcgcaagctgttcttcaacctg
cggggcgccaagaagcgtctggcctggctcaacaacgacgaggtcgatgccatcgccaag
gatctcgacgtcaagccgcaggtcgtgcgcgaaatggaagggcgcctgtcggccttcgat
gccggctatgatgccacgccgtccgaggaagaagaccaggggtaccaggcgccggcacac
tacctcgacgacgaacgtttcgaccccgccgcgcagctcgaggccgccgactgggaagag
gattccacgcaccgtctgcaagcggcgctcggcgaactcgacgagcgttcgcgggacatc
ctgcagcggcgctggctcgccgagtcgaaggcgaccctgcacgagcttgccgatgtgtat
ggcgtttccgccgagcgcattcgtcagctcgaaaagaacgccatgaagaagatcaagcag
caactgggcgataccctggctgcttga
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