Chromohalobacter israelensis: Csal_3070
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Entry
Csal_3070 CDS
T00347
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
csa
Chromohalobacter israelensis
Pathway
csa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Csal_3070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csa03019
]
Csal_3070
03016 Transfer RNA biogenesis [BR:
csa03016
]
Csal_3070
Enzymes [BR:
csa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Csal_3070
Messenger RNA biogenesis [BR:
csa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Csal_3070
Transfer RNA biogenesis [BR:
csa03016
]
Prokaryotic type
tRNA degradation factors
Csal_3070
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH_2
KH-I_KHDC4-BBP
OB_PDCD11
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
ABE60414
UniProt:
Q1QSZ4
LinkDB
All DBs
Position
complement(3419094..3421217)
Genome browser
AA seq
707 aa
AA seq
DB search
MNPVKKTFQYGHSTVTLETGRIARQATGAVMVTMDDTVVLCTVVAKKDVNPAQPFFPLSV
HYQEKTYAVGKIPGGFFKREGRPTEKETLTSRLIDRPIRPLFPNGFMNEVQVVCTVLSTD
RNHDPDIAAMLGTSAALAISGVPFNGPIGAARVGFNEDKGYFLNPTVEELESSELNMVVA
GTEKAVLMVESEAKELLEDEMLGAVLFGHQEMQAAITAIQALADEAGKPRWDWQPPTDDT
TLKSALAAEFEAKVGEAYRITDKMARQDALSALKDEALERLAGEESGQYAADDVKGAFAS
LEKRVVRSRIIQGEPRIDGRDHRTVRPLSIEVGTLPKTHGSAVFTRGETQAVVVATLGTL
RDAQLIESLEGERKDRFLLHYNFPPYSVGEAGFMGGPKRREIGHGRLARRGVQAMLPSEE
DFPYTIRVVSEITESNGSSSMASVCGSSLALMDAGVPLKAPVAGIAMGLVKDEDGFAVLT
DILGDEDHLGDMDFKVAGSTAGVTALQMDIKIEGINEEIMETALQQAHEARLHILEQMNT
VIAQSRSEVSDNAPSMATIKIDPDKIRDVIGKGGATIRKICDDTGASIDLDDDGTVRIYA
EDKTAAKAAIDTVLAITAEPEIGKLYRGTVARITDFGAFVTFMPGTDGLVHISQIVPERV
NDVRDYLSEGQEVIVKVLDIDNRNRVKLSIKEVTAEEKAAFEATPAE
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccggtcaagaaaacgtttcaatacggtcacagcaccgtcaccctggaaacgggc
cgcatcgcccgccaggccactggtgccgtgatggtcaccatggacgacaccgtggtgctc
tgtaccgtggtggccaagaaggacgtcaatcccgcgcaacccttcttcccgctctcggtg
cactatcaggaaaagacctatgcggtgggcaagatccccggtggtttcttcaagcgcgaa
ggccggcccaccgaaaaggaaaccctgacctcgcggttgatcgatcgcccgattcgcccg
ctgtttcccaacggcttcatgaatgaagtgcaggtcgtctgcacggtgctgtccaccgac
cgcaatcacgacccggatatcgcggcgatgctgggcacctccgccgcactggcgatttcc
ggggtcccgttcaacgggccgatcggcgcggcgcgcgtgggcttcaatgaagacaagggg
tatttcctcaacccgaccgtggaagagctggaaagctccgagctgaacatggtcgtggcc
ggtaccgaaaaggccgtcttgatggtcgagtccgaggccaaggaactgctcgaggatgaa
atgctcggtgcggtgctcttcggccaccaggaaatgcaggccgcgatcacggcgatccag
gcgctggccgacgaagccggcaagccgcgttgggactggcagccgccgaccgacgacacc
acgctcaagagtgcactggcggcggaattcgaagccaaggtgggcgaagcgtaccgcatc
accgacaagatggcgcgccaggatgccctgtccgcgctcaaggacgaggccctcgagcgc
ctggcgggagaagagtccggccagtatgctgccgacgatgtcaaaggggcgttcgcaagc
ctcgagaagcgtgtcgtgcgttcgcgcatcatccagggcgaaccgcgtatcgatgggcgc
gatcaccgtaccgtgcgtccgctgtcgatcgaagtcggcacccttcccaagacgcatggt
tcggccgtgttcacgcgtggcgagacccaggcggtcgtcgtcgcgaccctgggcaccctg
cgtgacgcccagttgatcgaatcgctggaaggcgaacgcaaggaccgcttcctgctgcac
tacaacttccccccctacagcgtgggcgaggctggtttcatgggcgggcccaagcgccgc
gagatcggccacggtcgtctggcgcggcgcggcgttcaggccatgctgcccagcgaggaa
gacttcccgtataccatccgcgtggtgtcggaaatcaccgaatccaacggttccagctcc
atggcgtcggtgtgcggctcctcgctggcactgatggatgccggcgtgccgctcaaggca
ccggtggcgggcatcgccatgggcctggtcaaggacgaggacggcttcgcggtactgacc
gacatcctcggcgacgaagatcacctcggcgacatggacttcaaggtcgccggttccacc
gccggcgtgacggccctgcagatggacatcaagatcgagggcatcaacgaagagatcatg
gaaaccgcgctgcagcaggcccacgaggcgcggctgcacattctcgagcagatgaacacg
gtgatcgcccagagccgcagcgaagtctccgacaacgcgccctcgatggctaccatcaag
atcgatcccgacaagattcgtgacgtcatcggcaagggcggcgccacgatccgcaagatc
tgcgacgataccggcgcgtcgatcgatctcgacgacgacggtaccgtacgcatttacgcc
gaggacaagacggcagccaaggcggcgatcgataccgtgctggcgattaccgccgaaccg
gaaatcggcaagctctatcgcggcaccgtggcgcgcatcaccgacttcggcgccttcgtc
accttcatgccgggtaccgatggtctggtgcacatctcgcagatcgtgcccgagcgtgtc
aacgacgtgcgtgactatctgagcgaaggccaggaggtcatcgtcaaggtgctcgatatc
gacaaccgcaaccgcgtgaagctctccatcaaggaagtcaccgcggaagaaaaagcggcg
ttcgaagcgactcccgccgagtaa
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integrated database retrieval system
