Chromohalobacter israelensis: Csal_3184
Help
Entry
Csal_3184 CDS
T00347
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
csa
Chromohalobacter israelensis
Brite
KEGG Orthology (KO) [BR:
csa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csa03009
]
Csal_3184
Enzymes [BR:
csa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Csal_3184
Ribosome biogenesis [BR:
csa03009
]
Prokaryotic type
rRNA helicases
Csal_3184
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
RhiE-like_linker
CMS1
AAA_30
AAA_22
Helicase_C_2
Motif
Other DBs
NCBI-ProteinID:
ABE60528
UniProt:
Q1QSN0
LinkDB
All DBs
Position
complement(3550603..3552000)
Genome browser
AA seq
465 aa
AA seq
DB search
MSDLSPRPDFATLPLAPALLANLASLGYHAMTPIQAESLPAILAGRDVIGQGQTGSGKTA
AFGLGVLAKLEVKAFRVQALVLCPTRELADQVAGEVRRLARGLGNVKVLTLCGGAPLKPQ
RDSLEHGAHVVVGTPGRIEEHLRKGSLTLGALTTLVLDEADRMLDMGFQAAIETIVGQTP
TSRQTLLFSATYGEGIRPVAERLMREPLAVEVASTHDDTSIRQHFFRVADEEARLPALER
LLLSHRPESSVVFCNTKRETQQVAEALNAAGFSALALNGDLEQPDRDRILAMFANKSVSV
LVATDVAARGLDIDALDAVFNYQIARELEVHVHRIGRTGRAGGRGVACTLVAEGERYRLE
KLGDFLGEPLACEPLPTLRGNPQPFTPRMTTLQLGAGKKQKVRPGDILGALTGEGGIAGD
QVGKIQITERSAFVAVEREVARAALDQLANGRIKGRSFRARRVTR
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgacttatcccctcgccccgacttcgccaccctgccgctggcgcctgcgttgctc
gccaacctggcgtcgctgggctaccacgcgatgacgccgatccaggccgagagcctgccg
gcgatactcgccgggcgcgacgtgatcggccagggccagaccggctcgggcaagacggcg
gcgttcggtctgggcgtgcttgcgaagctcgaagtgaaggcatttcgtgtgcaggcgctg
gtgttgtgtccgacccgcgagctggccgatcaggtcgccggtgaggtgcgtcggctggcg
cgtgggctgggcaacgtcaaggtgctgacgctgtgtggcggggcgccgctcaagccgcag
cgcgattcgctggaacatggcgcgcatgtggtggtggggaccccggggcggatcgaggag
cacctgcgcaagggctcgctgacactcggcgcgctgaccacgctggtgctggacgaagcc
gatcgcatgctcgacatgggcttccaggcggcgatcgagacgatcgtcggccagacgccg
acctcgcgtcagacgctgttgttcagtgccacctacggcgagggcatccggccggtcgcc
gagcgtctgatgcgtgaaccgctcgccgtggaggtcgcctcgacgcatgacgacaccagc
attcgtcagcatttcttccgggtcgccgacgaggaggctcgcctgccggcgctggagcgg
ctgttgctcagccatcgcccggagtccagcgtggtgttctgcaacaccaagcgcgagacg
caacaggtcgccgaggccctgaacgcggcgggcttttccgcgctggcgctcaatggcgat
cttgagcagcccgaccgcgaccgcatcttggcgatgtttgccaacaagagcgtgtcggtt
ctggtcgccaccgacgtggcggcgcgcgggctggacatcgatgcgctggatgcggtgttc
aattaccagatcgcccgcgaactcgaggttcacgtgcatcgcatcgggcgtaccggccgg
gccggtgggcgcggggtggcctgtacactggtcgccgagggtgagcgctatcgactcgaa
aagctcggcgacttcctcggcgagccgctggcctgcgaaccgttgccgacgctgcgcggc
aatccgcagcccttcacgccgcggatgacgacgttgcagctcggcgccggcaagaagcag
aaggtacgtccgggagacattctcggcgccttgaccggcgagggcggtatcgccggcgac
caggtcggcaagatccagatcaccgagcgcagtgccttcgtcgccgtcgagcgcgaggtg
gcccgtgctgcgctcgatcaactcgccaatggacggatcaaggggcggtcgttccgggcg
cgccgcgtcactcgctga
DBGET
integrated database retrieval system
