Castanea sativa (European chestnut): 142605508
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Entry
142605508 CDS
T11266
Name
(RefSeq) putative E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csaa04131
]
142605508
04121 Ubiquitin system [BR:
csaa04121
]
142605508
Enzymes [BR:
csaa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
142605508
Membrane trafficking [BR:
csaa04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
142605508
Ubiquitin system [BR:
csaa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
142605508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-rbx1
zf-RING_11
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4
zf-RING_5
zf-ANAPC11
CxC4
zf-RING_16
zf-Nse
zf-C3H2C3
zf_RING_Vps8_fungal
DZR
DZR_2
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
142605508
NCBI-ProteinID:
XP_075633018
LinkDB
All DBs
Position
8:complement(36694836..36697455)
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AA seq
293 aa
AA seq
DB search
MSNVGYTHWCYQCNRRLRLEGAIACPYCAEGFVEELNEIPEDVHPNSEDDSAQPVPDLFE
LMYTLMRQRSPDPRWELMDVVNGFLNQSRMAGGNTSIDVRGRSGLLPEQGWNAFGSGQYV
VLNRIPSPSSNGGPGSGPRRADFDDYFMGPGFQAFIEHLSTNDRQGPPPASHSSIDAMPT
IRITQAHMHTDSHCPVCKEKFELGSEARLMPCNHIYHTDCIVPWLVQHNSCPVCRLELPP
HGNDSTRGSRSRGTGNNVSSSSSSSSSSSSDYGGSGSRQNQGRRTAWPFWPFH
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatgttggatacacacactggtgctaccaatgcaatcggcgattaaggcttgag
ggagcaattgcctgcccttactgtgcagaaggctttgttgaagaactcaatgagatacca
gaagatgtccatcccaattcagaagatgattctgctcaaccagtacctgatctatttgaa
ctcatgtacacattgatgaggcagaggagtcctgacccaagatgggaacttatggatgtt
gttaatggctttttgaaccagagtagaatggctggaggaaacactagtatcgatgttagg
gggagatctggtttgcttcctgaacagggttggaatgcttttggctctggtcaatatgtt
gtactgaatcgcattcccagtccatcctctaatggcggtccaggaagtggacctaggcga
gctgattttgatgactattttatgggccctggatttcaagcattcatcgaacatctttct
acaaatgatcgacagggtccacctccagcatctcattcttcaattgatgcaatgcccact
attaggattacacaagcacatatgcacactgactcacactgtcctgtctgtaaggaaaaa
tttgagctgggctctgaagcaaggctgatgccatgtaaccatatttatcacactgattgt
attgttccttggttggttcagcacaactcatgtcctgtttgccgccttgagctgcctcct
catgggaatgatagtactcgtggtagtcggagtaggggcacagggaacaatgtcagcagc
agcagcagcagcagcagcagcagtagcagtgactatggcggctctggtagtcggcagaat
cagggaaggaggactgcatggcctttttggccattccactaa
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