Castanea sativa (European chestnut): 142605514
Help
Entry
142605514 CDS
T11266
Name
(RefSeq) pseudouridine-5'-phosphate glycosidase isoform X1
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa00240
Pyrimidine metabolism
csaa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
142605514
Enzymes [BR:
csaa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
142605514
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
Motif
Other DBs
NCBI-GeneID:
142605514
NCBI-ProteinID:
XP_075633024
LinkDB
All DBs
Position
8:complement(40061822..40071097)
Genome browser
AA seq
349 aa
AA seq
DB search
MASSALARISNLQRHFDPTEANNNKGGSDGFCGDLIKISPEVSEALLRGDAVVALESTII
SHGMPYPLNLETAKEVEAIVRTNGAVPATIAILDGIPCVGLSMEELERLAILGKRVQKTA
RRDIALVVASRGNGATTVSASMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGR
TPVAVVSAGVKSILDIPRTLEYLETQGVCVAAYKTNEFPAFFTETSGCKVPCRVDSPEDC
ARLIDANTKLKLNTGVLFAVPIPKEHSASGSIIESAIQKALKEARDKNITGNAETPFLLS
KVNELTGGASLAANMALVKNNALVGTRIAVALAQLRKSCNKVGNVESVS
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggcatcctctgcactcgcacgaatctccaatctccaaagacacttcgatcccacagag
gcaaataacaacaagggtggcagtgatgggttttgtggagacttaataaagatttctcca
gaggtttctgaagccttgttacgtggggatgcggtggttgctcttgaatccaccattatt
tcacatggaatgccatatcctctaaatttggaaactgcaaaggaggtggaggccattgtt
aggaccaacggtgctgttcctgctactattgcaattttagatggcataccatgtgtagga
ttgagtatggaagaattggagaggctcgccattttgggaaaaagagttcagaagacagct
cggagggacattgcgcttgttgtggcttccagagggaatggtgcaactactgtctctgct
tcaatgttcttcgcttctatggttggtatccctgtattcgtcactggggggattggagga
gtacatagacatggcgagcacacgatggacatatcatctgatcttactgagcttggaagg
accccagtagcagttgtctctgctggagtcaaatcaatattagatattcccaggacccta
gaatatttggaaacacagggagtttgcgttgctgcctacaaaaccaatgagtttccagct
ttttttacggaaacaagtggctgcaaggtgccttgtcgtgtagatagcccagaagactgt
gctcggcttatagatgcaaacacgaaactgaagcttaatacaggagttctatttgcagtt
ccaattcccaaagaacactcagcttctggaagcataattgaatctgctatacagaaagca
cttaaggaggctagggataagaacataactggaaatgctgaaactcctttcctgctttcc
aaagtgaatgaactaactggaggagcctcacttgctgcaaacatggcacttgtgaagaat
aatgctcttgttggtacaagaatagctgtagcccttgctcagctcaggaaatcttgtaat
aaagtaggcaatgtggagtcagtgtcatag
DBGET
integrated database retrieval system
