KEGG   Castanea sativa (European chestnut): 142605578
Entry
142605578         CDS       T11266                                 
Name
(RefSeq) protein DAMAGED DNA-BINDING 2
  KO
K10140  DNA damage-binding protein 2
Organism
csaa  Castanea sativa (European chestnut)
Pathway
csaa03420  Nucleotide excision repair
csaa04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:csaa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    142605578
  09124 Replication and repair
   03420 Nucleotide excision repair
    142605578
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:csaa04121]
    142605578
   03400 DNA repair and recombination proteins [BR:csaa03400]
    142605578
Ubiquitin system [BR:csaa04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     142605578
DNA repair and recombination proteins [BR:csaa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      142605578
SSDB
Motif
Pfam: WD40_Prp19 Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_EIPR1 WD40_CDC20-Fz WD40 Beta-prop_WDR3_1st Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EML WDR55 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_WDR75_1st WD_LRWD1 Beta-prop_CAF1B_HIR1 EIF3I WD40_RFWD3 Beta-prop_Aladin Beta-prop_IFT140_1st Beta-prop_DCAF4 Reovirus_M2
Other DBs
NCBI-GeneID: 142605578
NCBI-ProteinID: XP_075633108
LinkDB
Position
8:complement(20539020..20546175)
AA seq 555 aa
MAPQTRRMTFPNVVIERDTDSEPSSSDEEEEEEEEEVEEEEEKVVENKNEERMEEPLEAK
KKGKTPITISLKKVCKVCKKVGHEAGFKGATYIDCPMKPCFLCKMPGHTTMACPHRVATE
HGVIPAPRRNTRNPLEYVFERQFRPGVLRIKPAFVIPDEVTCAVIRYHSRRITCLEFHPT
SNNVLLSGDKKGQVGVWDFGKVHEKMVYGNIHSCIVNNMRFNPTNDDSVYAASSDGTISC
TDLETGISLSLMNLNPDGWQGPSSWRMLYGMDINSEKSLVLVADNFGFLYMVDTRSNNKI
GEAILIHKKGSKVVGLHCNPVQPELLLSCGNDHFARIWDLRRMEAGSSLYDLAHKRVVNS
AYFSPLSGSKILTTSQDNRLRIWDSIFGDLDSPSREIVHSHDFNRHLTPFKAEWDPKDPS
ESLVVIGRYISENYNGAALHPIDFIDISTGQLVAEVMDPNITTITPVNKLHPCDDVLASG
SSRSLFIWRPKKSELVEQKVERKIVICDRAEKKQSRKYGNKSDDSDDDKFTSKGKKLKSN
KPEWKLTRCSGKVKR
NT seq 1668 nt   +upstreamnt  +downstreamnt
atggccccacaaaccagaagaatgacatttcccaatgtggtcattgagagagacactgac
tctgaacccagttcgtccgatgaagaagaagaagaagaagaagaagaagtagaagaagaa
gaagaaaaagttgtggagaacaaaaatgaagagagaatggaggaacccttggaagcgaag
aagaaagggaaaacacccattactattagtctcaagaaagtttgcaaagtttgcaaaaaa
gtgggtcatgaagcgggattcaagggggctacgtatatagactgccccatgaaaccatgc
tttctctgcaaaatgcctggtcacactacaatggcttgcccgcatcgagtggctactgag
catggggtcatccctgcaccccgcagaaatacccgtaatccattggaatatgtctttgag
cgccagttcagaccaggcgttcttcggatcaaaccagcttttgtaatcccagatgaggtg
acttgtgcggttatcagatatcatagtagacgtataacgtgcttggagttccatccaaca
agcaataacgtccttttatctggagataagaaagggcaagttggagtttgggattttggt
aaagttcatgaaaagatggtctatggaaatattcactcttgcatagtgaataatatgagg
ttcaatcctacaaatgatgattcagtatatgctgcatcctcagatggaaccattagttgc
actgacttggagaccggaatttcattatctctgatgaatctcaatcctgatgggtggcag
ggtccaagcagctggaggatgctctatggcatggatatcaactcagagaaaagtcttgtg
ctggttgctgataacttcggttttctctacatggtggatactcgctcaaacaacaaaatt
ggggaggcaattttgatccataagaaaggtagcaaggtggttggactccactgcaatcct
gttcaaccagagcttcttttgagctgtggaaatgatcattttgctcgtatatgggatttg
cgtcgaatggaagctggatcttccctctatgaccttgcacacaaacgagttgttaactca
gcatatttctctccactgtcgggcagcaaaatcctgaccacatcacaggacaatcgtctt
cgtatatgggattctatatttggtgatttggactccccaagccgagaaatagtgcatagt
catgattttaatcgacatttgactccttttaaagcagaatgggatccaaaggacccttcg
gagtcccttgtagttattggtcgctacattagtgaaaattataatggagctgccttacat
cccattgatttcatagacatcagcactggacaactagttgctgaggtcatggatccaaac
atcacaactattactcctgtgaacaagctgcatccatgtgatgatgttttggcctctggt
agttcaaggtcacttttcatttggaggccaaagaagtctgagcttgtggaacagaaggtt
gaaaggaagatagttatttgcgatagagccgagaagaaacaaagtcgaaagtatgggaat
aaaagtgatgattctgatgatgacaaattcacctccaagggtaagaagttgaagtccaat
aaacctgaatggaaactaactcgctgttctggcaaggtcaaacgctaa

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