Castanea sativa (European chestnut): 142605595
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Entry
142605595 CDS
T11266
Name
(RefSeq) ruBisCO large subunit-binding protein subunit alpha
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
142605595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csaa03019
]
142605595
03110 Chaperones and folding catalysts [BR:
csaa03110
]
142605595
03029 Mitochondrial biogenesis [BR:
csaa03029
]
142605595
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csaa04147
]
142605595
Enzymes [BR:
csaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
142605595
Messenger RNA biogenesis [BR:
csaa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
142605595
Chaperones and folding catalysts [BR:
csaa03110
]
Heat shock proteins
HSP60 / Chaperonin
142605595
Mitochondrial biogenesis [BR:
csaa03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
142605595
Exosome [BR:
csaa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
142605595
Exosomal proteins of other body fluids (saliva and urine)
142605595
Exosomal proteins of breast cancer cells
142605595
Exosomal proteins of colorectal cancer cells
142605595
Exosomal proteins of bladder cancer cells
142605595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
gpW
Mito_fiss_Elm1
DUF1192
Motif
Other DBs
NCBI-GeneID:
142605595
NCBI-ProteinID:
XP_075633125
LinkDB
All DBs
Position
8:36501603..36506727
Genome browser
AA seq
586 aa
AA seq
DB search
MASTNAISTASILCSPKQSLSRSGNQQKQSNRLNFRQSSSRFVVRASAKEIAFDQHSRSA
LQAGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDAMENAGAALIRE
VASKTNDSAGDGTTTASILAREIIKLGLLSVTSGANPVSIKKGIDKTVLGLIEELEKKAR
PVKGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFETTVEVEEGMEID
RGYISPQFVTNPEKLIAEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVSG
EALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAILTGAEFQASDLGLLIENTSVEQ
LGLARKVTVTKDSTTIIADAASKDELQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV
AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSTIVPSIKDKIEDA
DERLGADIVQKALIAPASLIAQNAGIEGEVVVEKIKVREWEVGYNAMTDKYENLVEAGVI
DPAKVTRCALQNAASVAGMVLTTQAIVVEKPKPKTPMAAPPQGLSV
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaaccaacgctatttccaccgcctccattctctgctcccccaaacagagcttg
agcaggagtgggaaccagcaaaaacagagcaacaggctcaatttcaggcaatcgagtagc
cggtttgttgtgagggcttctgcaaaggaaatagcattcgaccagcattcaaggtctgca
ttacaggccggaattgataagcttgctgatgctgttggccttactcttggtcctaggggg
aggaatgttgtcttggatgaatttggaagtcctaaagtagtaaatgatggagtcacaatt
gcgcgagctattgagctccccgatgctatggaaaatgctggtgcagctctcattagggag
gttgcaagtaaaacaaatgactctgctggtgatgggacaacgactgcatcaattctggca
agggaaataattaaattgggtcttttaagcgtcacttctggtgctaacccagtctcaata
aagaaggggattgataaaactgttctagggttgatagaagagttggagaagaaggctagg
cctgttaaaggtcgtgatgatatcaaagctgttgctaccatatctgctgggaatgatgat
cttattgggacaatgattgcggatgcaattgacaaggttgggccagatggtgttttgtcc
attgagtcctcatcttcatttgagacaactgttgaagttgaagaaggaatggagattgac
agaggttatatctcccctcaatttgttacaaacccggaaaagttgattgctgagtttgaa
aatgctagagtcttggttacggatcagaagatttcagcaataaaggacataattccactg
ttagagaagaccacgcaattgagagcccctttgcttataattgcagaggatgttagtggg
gaggccttggctactcttgttgtaaataagctacggggcattctcaatgttgctgcaatt
aaagctcctggttttggtgagaggagaaaagctctccttcaagatattgccattttgaca
ggagctgagttccaagccagtgatctgggtctgcttattgagaacacctctgttgagcaa
cttggtttagctagaaaggtgaccgtcaccaaggattccaccaccattattgcagatgct
gcatcaaaggatgagttacaagcaaggattgcacagttgaagaaggaattggcagagaca
gattcagtttatgactcagaaaaactagctgagcgaattgccaaattgtctggtggggta
gctgtaataaaagtgggtgctgcaacagagactgaacttgaggaccgtaaacttcgtatt
gaagatgccaagaatgctacttttgcagccatagaggaagggattgtgcctggtggtggt
gctgcattggttcatctctcaactatagtaccttcaattaaggacaagattgaagatgca
gatgagcgactaggtgctgatattgtgcagaaggcactgattgctccagcatcactgata
gctcaaaatgctggaattgaaggcgaggtagttgtggagaagataaaggttagggaatgg
gaagttggctataatgccatgacagacaagtatgagaacctggtggaggctggagttatt
gatccagccaaggtgactcgatgtgcgctgcaaaatgctgcatcagttgcaggaatggtc
ctgaccactcaggccattgttgtggaaaagcctaagcccaagacacctatggctgctccc
ccacaaggactatctgtgtaa
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